Functional clusters
Information
- Type Gene Ontology
- Description exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 3 | CH_acertr_112 | 3 | 3 | 0.00000002982 |
| Brassica carinata | ChrC08 | 3 | CH_bca_998 | 2 | 2 | 0.000961939 |
| Brassica oleracea | C9 | 3 | CH_bol_373 | 2 | 2 | 0.000686409 |
| Brassica rapa | A10 | 3 | CH_bra_281 | 2 | 2 | 0.00064397 |
| Glycine max | Gm05 | 3 | CH_gma_534 | 3 | 37 | 0.000937414 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_552 | 3 | 3 | 0.0000000355983 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_79 | 3 | 3 | 0.0000000626267 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_256 | 2 | 2 | 0.000221664 |
| Acer truncatum | chr6 | 4 | CH_acertr_112 | 3 | 3 | 0.00000002982 |
| Brassica carinata | ChrC08 | 4 | CH_bca_998 | 2 | 2 | 0.000961939 |
| Brassica oleracea | C9 | 4 | CH_bol_373 | 2 | 2 | 0.000686409 |
| Brassica rapa | A10 | 4 | CH_bra_281 | 2 | 2 | 0.00064397 |
| Glycine max | Gm05 | 4 | CH_gma_534 | 3 | 37 | 0.000937414 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_552 | 3 | 3 | 0.0000000355983 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_79 | 3 | 3 | 0.0000000626267 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_256 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |