Functional clusters
Information
- Type Gene Ontology
- Description SAGA complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carica papaya | supercontig_25 | 3 | CH_cpa_128 | 4 | 39 | 0.0000264945 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_804 | 3 | 4 | 0.00000518195 |
| Sapria himalayana | scaffold51_3900769 | 3 | CH_shi_93 | 3 | 4 | 0.00000109847 |
| Tripterygium wilfordii | NC_052243.1 | 3 | CH_twi_77 | 4 | 7 | 0.00000000901954 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_69 | 4 | 4 | 0.00000000172135 |
| Carica papaya | supercontig_25 | 4 | CH_cpa_128 | 4 | 39 | 0.0000264945 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_804 | 3 | 4 | 0.00000518195 |
| Sapria himalayana | scaffold51_3900769 | 4 | CH_shi_93 | 3 | 4 | 0.00000109847 |
| Tripterygium wilfordii | NC_052243.1 | 4 | CH_twi_77 | 4 | 7 | 0.00000000901954 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_69 | 4 | 4 | 0.00000000172135 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |