Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044371.1 1 CH_cansat_98 4 16 0.0000000231669
Fragaria vesca Fvb7 1 CH_fve_460 2 2 0.000589102
Physcomitrium patens Chr24 1 CH_ppa_257 2 2 0.000367636
Prunus persica Pp02 1 CH_ppe_470 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_736 2 2 0.000398653
Schrenkiella parvula ch6-6 1 CH_spa_266 2 2 0.000472404
Vanilla planifolia CM028152.1 1 CH_vpl_374 2 2 0.00073888
Cannabis sativa NC_044371.1 2 CH_cansat_98 4 16 0.0000000231669
Fragaria vesca Fvb7 2 CH_fve_460 2 2 0.000589102
Physcomitrium patens Chr24 2 CH_ppa_257 2 2 0.000367636
Prunus persica Pp02 2 CH_ppe_470 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_736 2 2 0.000398653
Schrenkiella parvula ch6-6 2 CH_spa_266 2 2 0.000472404
Vanilla planifolia CM028152.1 2 CH_vpl_374 2 2 0.00073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001