Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14350 Brassica napus
A07p34120 Brassica napus
Aa31sc48G70 Aethionema arabicum
Actinidia30669 Actinidia chinensis
AL2G26260 Arabidopsis lyrata
Aqoxy5G03509 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9W4XT6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0WBES Arachis hypogaea
AT1G67590 Arabidopsis thaliana
ATR0824G166 Amborella trichopoda
Atru.chr11.2274 Acer truncatum
AUR62005576 Chenopodium quinoa
AUR62024154 Chenopodium quinoa
BcaB03g15184 Brassica carinata
BcaB05g24298 Brassica carinata
BcaB05g24299 Brassica carinata
BcaC03g14853 Brassica carinata
BolC2t08463H Brassica oleracea
BolC6t39174H Brassica oleracea
BraA02t06496Z Brassica rapa
BraA07t31038Z Brassica rapa
C02p23240 Brassica napus
C06p42650 Brassica napus
CAN.G947.28 Capsicum annuum
CANSAT01G1127 Cannabis sativa
CANSAT01G1284 Cannabis sativa
CARHR060170 Cardamine hirsuta
Carub.0002s1393 Capsella rubella
Ca_18063_v3 Cicer arietinum L.
Cc11_g16640 Coffea canephora
Cfa009317 Carpinus fangiana
Cfa009318 Carpinus fangiana
Cfa021058 Carpinus fangiana
CiPaw.05G114600 Carya illinoinensis
CiPaw.06G099900 Carya illinoinensis
ClCG08G017290 Citrullus lanatus
COL.COLO4_12811 Corchorus olitorius
Cpa.g.sc43.34 Carica papaya
CsaV3_2G025340 Cucumis sativus L.
CSS0014265 Camellia sinensis var. sinensis
DCAR_031183 Daucus carota
Dinv10990 Davidia involucrata
Dinv14805 Davidia involucrata
Duzib248G1043 Durio zibethinus
Duzib251G0024 Durio zibethinus
ECA234G0324 Erigeron canadensis
EL10Ac6g13443 Beta vulgaris
Eucgr.B03464 Eucalyptus grandis
FAN07G2757 Fragaria x ananassa
FAN12G4104 Fragaria x ananassa
FAN17G2842 Fragaria x ananassa
FAN22G2239 Fragaria x ananassa
FvH4_4g24210 Fragaria vesca
Glyma.05G145700 Glycine max
Glyma.08G102500 Glycine max
Gohir.A01G155800 Gossypium hirsutum
Gohir.A05G311200 Gossypium hirsutum
Gohir.D01G154266 Gossypium hirsutum
Gohir.D05G312000 Gossypium hirsutum
Gorai.002G191000 Gossypium raimondii
Gorai.009G333200 Gossypium raimondii
GSVIVG01010339001 Vitis vinifera
HanXRQChr08g0207501 Helianthus annuus
HanXRQChr08g0207511 Helianthus annuus
HanXRQChr12g0385931 Helianthus annuus
Haze_12372 Corylus avellana
Hma1.2p1_1340F.1_g276780 Hydrangea macrophylla
HPP92_001245 Vanilla planifolia
HPP92_001261 Vanilla planifolia
Hund06068 Selenicereus undatus
Lalb_Chr03g0039231 Lupinus albus
Lalb_Chr03g0039241 Lupinus albus
Lalb_Chr07g0187331 Lupinus albus
Lalb_Chr13g0294161 Lupinus albus
Lalb_Chr13g0294171 Lupinus albus
Lj4g0009016 Lotus japonicus
Lj6C822T14 Lonicera japonica
Lsat_1_v5_gn_4_2920 Lactuca sativa
Lsat_1_v5_gn_8_149761 Lactuca sativa
Manes.13G016200 Manihot esculenta
MBI08_g36441_MAGBIO Magnolia biondii
MBI11_g35371_MAGBIO Magnolia biondii
MBI11_g46744_MAGBIO Magnolia biondii
MD13G1113300 Malus domestica
MD16G1112600 Malus domestica
Medtr8g080180 Medicago truncatula
MELO3C010730.2 Cucumis melo
Migut.E00242 Erythranthe guttata
Migut.K00701 Erythranthe guttata
MSTRG.11688 Avicennia marina
MSTRG.13321 Avicennia marina
MSTRG.522 Avicennia marina
Nitab4.5_0000240g0120 Nicotiana tabacum
Nitab4.5_0007557g0010 Nicotiana tabacum
Nn3g16536 Nelumbo nucifera
Oeu020312.1 Olea europaea
Oeu042062.1 Olea europaea
Os02g0602000 Oryza sativa ssp. japonica
Peaxi162Scf00128g00929 Petunia axillaris
Peaxi162Scf00797g00115 Petunia axillaris
PGR102G1157 Punica granatum
PGSC0003DMG400017445 Solanum tuberosum
Phvul.002G175800 Phaseolus vulgaris
Potri.008G178300 Populus trichocarpa
Potri.010G056800 Populus trichocarpa
Prupe.1G232800 Prunus persica
Psat7g079520 Pisum sativum
PSO063G5034 Papaver somniferum
PSO782G1057 Papaver somniferum
QL03p054693 Quercus lobata
RcHm_v2.0_Chr4g0431051 Rosa chinensis
Rhsim12G0029700 Rhododendron simsii
Sabra08G0136100 Salix brachista
Sabra10G0048400 Salix brachista
SalBow2G0748 Salvia bowleyana
Sc11g0000640 Simmondsia chinensis
Sc14g0008990 Simmondsia chinensis
Sed0020525 Sechium edule
Sed0026720 Sechium edule
SGA_v2.0_scaffold87G27129 Striga asiatica
Sopen05g009890 Solanum pennellii
Sp5g22610 Schrenkiella parvula
TAR374G0791 Trochodendron aralioides
TAR622G0018 Trochodendron aralioides
THA.LOC104807651 Tarenaya hassleriana
THA.LOC104825517 Tarenaya hassleriana
Thecc.02G274700 Theobroma cacao
Thhalv10018804m.g Eutrema salsugineum
TPR.G17101 Trifolium pratense
TWI18G1462 Tripterygium wilfordii
TWI36G0420 Tripterygium wilfordii
TWI36G0711 Tripterygium wilfordii
vmacro01081 Vaccinium macrocarpon
vmacro01082 Vaccinium macrocarpon
VMungo0251G3265 Vigna mungo
Zm00001eb182310 Zea mays
Zm00001eb184010 Zea mays

User provided reference genes

Program Settings