Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05580 Brassica napus
Aa31LG1G8880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3870 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2860 Anthoceros agrestis
Actinidia03058 Actinidia chinensis
Actinidia03059 Actinidia chinensis
Actinidia07008 Actinidia chinensis
Actinidia24487 Actinidia chinensis
Actinidia38276 Actinidia chinensis
Ah.06g194980 Amaranthus hybridus
AL6G31010 Arabidopsis lyrata
Aqoxy1G00052 Aquilegia oxysepala
Aqoxy3G02282_Aqoxy3G02283 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3IGY6I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJZR4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHSV0C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y38JVD Arachis hypogaea
AT5G19500 Arabidopsis thaliana
ATR0115G029 Amborella trichopoda
ATR0782G174 Amborella trichopoda
Atru.BG.272.p Acer truncatum
Atru.chr12.764 Acer truncatum
Atru.chr12.765 Acer truncatum
AUR62000241 Chenopodium quinoa
AUR62006588 Chenopodium quinoa
BcaB05g23382 Brassica carinata
BcaC03g13680 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02370 Brassica napus
BolC2t06958H Brassica oleracea
BraA02t05510Z Brassica rapa
CAN.G1085.3 Capsicum annuum
CAN.G1099.11 Capsicum annuum
CANSAT54G0304 Cannabis sativa
CARHR193400 Cardamine hirsuta
Carub.0006s1785 Capsella rubella
Ca_06175_v3 Cicer arietinum L.
Cc01_g07130 Coffea canephora
Cc09_g02070 Coffea canephora
CDE02G1319 Ceratophyllum demersum
CDE05G3302 Ceratophyllum demersum
Cfa010158 Carpinus fangiana
Cfa021506 Carpinus fangiana
Ciclev10018028m.g Citrus clementina
Ciclev10031308m.g Citrus clementina
CiPaw.01G273300 Carya illinoinensis
CiPaw.13G146000 Carya illinoinensis
ClCG03G014310 Citrullus lanatus
ClCG08G007470 Citrullus lanatus
COL.COLO4_00327 Corchorus olitorius
COL.COLO4_23686 Corchorus olitorius
COL.COLO4_23687 Corchorus olitorius
Cpa.g.sc34.194 Carica papaya
Cpa.g.sc34.195 Carica papaya
Cre13.g572200 Chlamydomonas reinhardtii
CsaV3_1G041910 Cucumis sativus L.
CsaV3_6G036380 Cucumis sativus L.
CSS0013509 Camellia sinensis var. sinensis
CSS0029358 Camellia sinensis var. sinensis
DCAR_001217 Daucus carota
DCAR_019108 Daucus carota
Dinv11778 Davidia involucrata
Dinv35888 Davidia involucrata
Duzib150G0536 Durio zibethinus
ECA233G3436 Erigeron canadensis
ECA238G1416 Erigeron canadensis
EL10Ac4g10057 Beta vulgaris
Eucgr.B03764 Eucalyptus grandis
Eucgr.G02826 Eucalyptus grandis
FAN01G2474 Fragaria x ananassa
FAN06G4872 Fragaria x ananassa
FAN10G2586 Fragaria x ananassa
FAN10G4213 Fragaria x ananassa
FAN25G2256 Fragaria x ananassa
FvH4_3g27580 Fragaria vesca
FvH4_7g19650 Fragaria vesca
Glyma.16G154700 Glycine max
Gohir.A09G109701 Gossypium hirsutum
Gohir.A13G024000 Gossypium hirsutum
Gohir.D09G106200 Gossypium hirsutum
Gohir.D13G022900 Gossypium hirsutum
Gorai.006G123700 Gossypium raimondii
Gorai.013G025600 Gossypium raimondii
GSVIVG01016284001 Vitis vinifera
GSVIVG01022954001 Vitis vinifera
GSVIVG01037380001 Vitis vinifera
HanXRQChr01g0011501 Helianthus annuus
HanXRQChr12g0378151 Helianthus annuus
Haze_16897 Corylus avellana
Haze_23544 Corylus avellana
Hma1.2p1_1004F.1_g246830 Hydrangea macrophylla
Hma1.2p1_1632F.1_g294660 Hydrangea macrophylla
HPP92_001660 Vanilla planifolia
Hund07482 Selenicereus undatus
Lalb_Chr10g0106031 Lupinus albus
Lalb_Chr10g0106041 Lupinus albus
Lalb_Chr19g0129681 Lupinus albus
Lj1A914G42 Lonicera japonica
Lj2A826G17 Lonicera japonica
Lj2A826G18 Lonicera japonica
Lj2A826T21 Lonicera japonica
Lj5g0014900 Lotus japonicus
LjContig00564g0003567 Lotus japonicus
Lsat_1_v5_gn_2_114281 Lactuca sativa
Lsat_1_v5_gn_5_64961 Lactuca sativa
Manes.02G134100 Manihot esculenta
Manes.10G045400 Manihot esculenta
Mapoly0007s0093 Marchantia polymorpha
MCO13G640 Micromonas commoda
MCO14G107 Micromonas commoda
MD03G1163200 Malus domestica
MD03G1163300 Malus domestica
MD07G1175000 Malus domestica
Medtr5g088730 Medicago truncatula
MELO3C015606.2 Cucumis melo
MELO3C019793.2 Cucumis melo
Migut.D00702 Erythranthe guttata
Migut.F01778 Erythranthe guttata
MSTRG.21324 Avicennia marina
MSTRG.8154 Avicennia marina
MSTRG.8155 Avicennia marina
Nitab4.5_0000575g0260 Nicotiana tabacum
Nitab4.5_0002161g0020 Nicotiana tabacum
Nitab4.5_0002567g0150 Nicotiana tabacum
Nitab4.5_0010934g0010 Nicotiana tabacum
Nn2g10780 Nelumbo nucifera
Nn2g14595 Nelumbo nucifera
Oeu025946.1 Olea europaea
Oeu027482.2 Olea europaea
Oeu043944.1 Olea europaea
Os03g0254200 Oryza sativa ssp. japonica
Os07g0662800 Oryza sativa ssp. japonica
Peaxi162Scf00234g00315 Petunia axillaris
Peaxi162Scf00809g00432 Petunia axillaris
PGR142G0620 Punica granatum
PGSC0003DMG400024391 Solanum tuberosum
PGSC0003DMG400027414 Solanum tuberosum
Phvul.004G082300 Phaseolus vulgaris
Potri.001G224950 Populus trichocarpa
Potri.008G040400 Populus trichocarpa
Potri.010G221900 Populus trichocarpa
Pp3c11_25650 Physcomitrium patens
Pp3c8_8340 Physcomitrium patens
PRCOL_00002329 Prasinoderma coloniale
PRCOL_00003076 Prasinoderma coloniale
Prupe.2G214200 Prunus persica
Prupe.4G269300 Prunus persica
Psat0s2703g0240 Pisum sativum
PSO339G3050 Papaver somniferum
PSO357G0695 Papaver somniferum
PSO384G5085 Papaver somniferum
QL01p000796 Quercus lobata
QL01p020717 Quercus lobata
QL08p056026 Quercus lobata
RcHm_v2.0_Chr1g0363461 Rosa chinensis
RcHm_v2.0_Chr5g0050121 Rosa chinensis
RcHm_v2.0_Chr7g0211671 Rosa chinensis
Rhsim03G0120900 Rhododendron simsii
Rhsim13G0203000 Rhododendron simsii
Sabra10G0171700 Salix brachista
Sabra16G0133600 Salix brachista
SalBow3G0063 Salvia bowleyana
SalBow6G4759 Salvia bowleyana
Sc11g0003590 Simmondsia chinensis
Sc11g0003600 Simmondsia chinensis
Sed0006152 Sechium edule
Sed0023945 Sechium edule
SEGI_26742 Sequoiadendron giganteum
SEGI_29926 Sequoiadendron giganteum
SEGI_40232 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04523 Striga asiatica
SMO115G0099 Selaginella moellendorffii
SMO115G0193 Selaginella moellendorffii
Solyc04g049340.3 Solanum lycopersicum
Solyc11g072170.2 Solanum lycopersicum
Sopen04g019250 Solanum pennellii
Sopen11g029820 Solanum pennellii
Sp6g24900 Schrenkiella parvula
TAR623G1513 Trochodendron aralioides
TAR633G2007 Trochodendron aralioides
THA.LOC104811210 Tarenaya hassleriana
Thecc.09G250900 Theobroma cacao
Thecc.10G072900 Theobroma cacao
Thhalv10013310m.g Eutrema salsugineum
TPR.G16429 Trifolium pratense
TWI15G0175 Tripterygium wilfordii
TWI59G0614 Tripterygium wilfordii
unitig_0.g312 Utricularia gibba
vmacro04091 Vaccinium macrocarpon
vmacro07076 Vaccinium macrocarpon
VMungo0464G0799 Vigna mungo
Zm00001eb329970 Zea mays

User provided reference genes

Program Settings