Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 5.3e-151 537.7 283 100.0
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.7e-147 525.4 283 98.6
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 1.8e-130 469.5 288 85.4
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 5.9e-126 454.5 281 83.6
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 5.0e-125 451.4 285 83.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.4e-124 449.9 265 87.9
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.2e-124 448.7 287 82.9
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 4.2e-124 448.4 281 83.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.2e-123 446.8 285 82.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 4.7e-123 444.9 281 82.2
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.6e-121 439.1 276 84.1
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 5.9e-118 427.9 262 84.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 3.8e-117 425.2 274 81.8
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 6.5e-117 424.5 262 83.6
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 8.5e-117 424.1 270 80.7
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 8.5e-117 424.1 262 83.6
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.5e-116 422.5 262 83.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 2.5e-116 422.5 261 83.5
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.5e-116 422.5 262 83.2
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 5.5e-116 421.4 261 83.5
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.2e-116 421.0 272 80.9
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 7.2e-116 421.0 261 85.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 9.4e-116 420.6 262 82.4
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 9.4e-116 420.6 262 83.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-115 420.2 262 82.4
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.6e-115 419.9 262 82.4
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.6e-115 419.9 262 84.4
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.6e-115 419.9 262 83.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.1e-115 419.5 262 82.1
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 2.7e-115 419.1 255 84.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.7e-115 419.1 261 82.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.6e-115 418.7 262 82.4
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 3.6e-115 418.7 262 82.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.6e-115 418.7 262 83.6
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.1e-115 417.9 262 82.1
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 8.0e-115 417.5 262 82.4
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.0e-115 417.5 262 81.7
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 8.0e-115 417.5 261 83.1
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.3e-114 416.0 264 82.6
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.3e-114 416.0 262 82.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 3.0e-114 415.6 261 81.6
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 3.9e-114 415.2 262 82.1
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.2e-114 414.8 262 82.4
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 8.8e-114 414.1 262 81.7
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.1e-113 413.7 275 77.8
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.1e-113 413.7 275 79.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.5e-113 413.3 262 80.5
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.5e-113 413.3 261 82.8
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 2.0e-113 412.9 261 80.8
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 2.0e-113 412.9 275 77.8
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.0e-113 412.9 262 83.2
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.6e-113 412.5 275 77.8
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.6e-113 412.5 262 81.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.6e-113 412.5 262 80.9
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.6e-113 412.5 261 82.4
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 3.3e-113 412.1 261 80.8
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 4.4e-113 411.8 261 81.2
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.4e-113 411.8 265 80.0
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 5.7e-113 411.4 262 80.9
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.7e-113 411.4 261 82.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 7.4e-113 411.0 262 80.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.3e-112 410.2 262 80.9
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.7e-112 409.8 275 77.5
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.7e-112 409.8 275 77.5
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 2.8e-112 409.1 266 79.3
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 6.3e-112 407.9 263 80.2
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 8.2e-112 407.5 261 82.8
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.1e-111 407.1 262 80.5
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 2.4e-111 406.0 266 78.6
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.4e-111 406.0 262 78.6
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 5.3e-111 404.8 266 78.6
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 5.3e-111 404.8 261 79.7
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 9.1e-111 404.1 277 76.2
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 9.1e-111 404.1 255 83.1
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-110 403.7 277 75.8
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 2.6e-110 402.5 262 79.0
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 3.5e-110 402.1 250 83.6
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 5.9e-110 401.4 263 78.3
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 5.9e-110 401.4 260 78.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 5.9e-110 401.4 260 78.8
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 5.9e-110 401.4 252 82.5
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 5.9e-110 401.4 268 79.5
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.2e-109 399.4 262 79.8
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 5.0e-109 398.3 262 80.2
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 5.0e-109 398.3 255 81.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 6.5e-109 397.9 261 78.9
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.5e-108 396.7 261 79.7
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.5e-108 396.0 271 77.1
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 3.2e-108 395.6 263 77.2
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 3.2e-108 395.6 262 77.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 9.4e-108 394.0 250 82.4
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.7e-107 392.5 250 82.0
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.7e-107 391.7 262 77.1
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 4.0e-106 388.7 252 80.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.2e-105 387.1 256 77.7
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 2.0e-105 386.3 238 84.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 5.7e-105 384.8 264 74.6
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 5.3e-103 378.3 283 73.1
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 9.1e-103 377.5 253 77.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.6e-102 376.7 264 75.0
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 7.7e-102 374.4 284 73.6
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.0e-101 374.0 261 72.8
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.5e-100 370.2 264 70.8
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 3.2e-100 369.0 222 85.1
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 7.2e-100 367.9 238 81.5
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.6e-99 366.7 221 84.6
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 4.4e-97 358.6 262 71.0
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.2e-96 356.3 264 67.4
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.8e-96 355.9 284 65.5
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.5e-94 349.0 262 68.7
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.3e-93 346.3 256 69.5
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.5e-92 343.6 262 71.4
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.0e-91 337.8 253 67.6
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 7.5e-89 331.3 262 69.5
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.1e-83 313.2 254 66.5
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.0e-82 310.8 209 78.5
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-66 257.7 257 52.1
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.1e-66 256.1 179 72.1
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 8.3e-64 248.1 150 84.0
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.1e-63 245.7 161 80.7
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.0e-62 241.9 262 55.0
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-55 221.1 151 76.2
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.1e-51 204.9 235 45.1
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.4e-47 193.4 250 40.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.6e-46 189.1 262 46.9
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.0e-41 173.7 240 42.1
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.1e-34 149.8 98 80.6
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.1e-34 149.8 95 75.8
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.0e-34 149.4 240 36.7
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.3e-29 133.7 73 91.8
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.2e-27 125.6 71 88.7
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.4e-26 123.6 117 60.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 5.8e-25 119.0 248 33.1
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 5.1e-21 105.9 96 59.4
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.2e-09 68.2 72 56.9


User provided reference genes

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