Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 3.7e-151 538.1 261 100.0
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 2.3e-148 528.9 261 98.1
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 3.0e-108 395.6 258 72.1
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 5.6e-107 391.3 261 71.3
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 2.8e-106 389.0 262 72.5
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 4.5e-104 381.7 258 70.2
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 6.4e-103 377.9 259 70.7
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 6.2e-98 361.3 259 69.1
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.7e-87 326.6 264 58.3
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 6.5e-87 324.7 263 58.9
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 1.4e-86 323.6 261 59.0
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 2.5e-86 322.8 264 58.3
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 2.3e-84 316.2 263 57.4
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 1.5e-83 313.5 261 58.6
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.3e-83 312.0 261 58.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 3.7e-82 308.9 259 57.9
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 2.4e-81 306.2 261 57.5
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 4.5e-80 302.0 261 57.5
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 5.9e-80 301.6 264 59.8
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 7.7e-80 301.2 261 56.7
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 7.7e-80 301.2 264 59.1
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 1.0e-79 300.8 261 56.3
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 1.0e-79 300.8 262 55.3
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 1.3e-79 300.4 264 59.5
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 1.7e-79 300.1 264 59.5
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 3.8e-79 298.9 261 59.0
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 3.8e-79 298.9 268 55.2
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 8.5e-79 297.7 268 54.9
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 2.5e-78 296.2 259 57.1
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 2.5e-78 296.2 263 57.0
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.2e-78 294.7 259 57.1
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.2e-78 294.7 259 56.8
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 7.9e-77 291.2 258 55.0
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 1.0e-76 290.8 261 59.0
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.9e-76 288.9 258 55.0
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 5.1e-76 288.5 265 53.2
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.7e-76 288.1 259 57.5
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 8.8e-76 287.7 264 54.9
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 8.8e-76 287.7 261 54.4
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 1.1e-75 287.3 263 53.2
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.1e-75 287.3 259 57.1
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 1.5e-75 287.0 265 54.0
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 2.5e-75 286.2 258 53.5
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 2.5e-75 286.2 259 56.8
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.5e-75 286.2 259 56.8
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.3e-75 285.8 259 56.8
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 5.7e-75 285.0 264 52.3
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 1.3e-74 283.9 259 55.2
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.2e-74 283.1 259 56.4
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.2e-74 283.1 259 56.4
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 2.8e-74 282.7 259 55.6
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 2.8e-74 282.7 265 52.5
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 3.7e-74 282.3 263 53.2
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 4.8e-74 282.0 265 52.5
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 8.2e-74 281.2 261 53.6
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 8.2e-74 281.2 263 53.2
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 2.4e-73 279.6 258 53.5
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 2.4e-73 279.6 258 53.5
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 2.4e-73 279.6 258 53.5
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 4.1e-73 278.9 263 52.5
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 5.3e-73 278.5 263 51.7
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 6.9e-73 278.1 260 52.3
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 6.9e-73 278.1 268 53.0
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 6.9e-73 278.1 263 52.1
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 6.9e-73 278.1 258 53.1
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.2e-72 277.3 261 55.6
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.2e-72 277.3 263 52.5
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 1.5e-72 276.9 262 51.5
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 2.6e-72 276.2 258 52.7
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 1.7e-71 273.5 261 53.6
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 2.2e-71 273.1 260 51.9
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 3.8e-71 272.3 251 53.4
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 8.5e-71 271.2 259 53.3
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.1e-70 270.8 259 53.3
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 1.1e-70 270.8 259 52.9
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.4e-70 270.4 262 51.9
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.4e-70 270.4 259 51.7
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.5e-70 269.6 262 51.1
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 4.2e-70 268.9 262 51.5
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 9.4e-70 267.7 259 52.5
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.1e-67 260.8 258 50.0
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 3.7e-66 255.8 219 57.5
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.8e-65 253.4 216 59.7
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 1.2e-64 250.8 259 48.6
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 5.9e-64 248.4 227 54.6
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 5.0e-63 245.4 254 48.8
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.9e-62 243.4 314 42.7
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 9.4e-62 241.1 231 53.2
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.1e-61 240.0 265 47.9
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 6.1e-61 238.4 225 54.7
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 9.7e-59 231.1 235 51.5
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 1.3e-58 230.7 227 51.5
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 3.7e-58 229.2 262 45.8
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 1.1e-57 227.6 259 46.7
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 2.7e-56 223.0 154 69.5
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 2.7e-56 223.0 154 69.5
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 2.7e-56 223.0 154 69.5
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.7e-56 223.0 154 70.8
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 6.5e-55 218.4 259 44.4
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.9e-54 216.9 234 49.6
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 2.5e-54 216.5 259 45.9
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 6.8e-52 208.4 163 63.2
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 1.1e-49 201.1 185 54.6
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 2.0e-43 180.3 164 57.3
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 2.8e-42 176.4 186 50.5
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.7e-42 176.0 151 55.0
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 1.1e-41 174.5 116 74.1
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 2.4e-41 173.3 249 38.2
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 5.0e-39 165.6 112 74.1
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 4.0e-36 156.0 153 49.7
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 6.4e-34 148.7 261 34.1
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 8.3e-34 148.3 106 66.0
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 1.2e-32 144.4 204 39.2
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 7.8e-32 141.7 255 32.5
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 7.8e-32 141.7 149 48.3
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 1.0e-31 141.4 106 64.2
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.2e-29 134.4 80 75.0
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 6.2e-29 132.1 124 48.4
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 4.4e-27 125.9 168 42.9
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 6.0e-24 115.5 167 40.7
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.3e-23 114.4 159 43.4
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 2.9e-18 96.7 74 55.4
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 4.9e-18 95.9 71 53.5
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.1e-16 90.5 76 53.9
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.7e-15 87.4 121 39.7
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 5.2e-12 75.9 67 52.2
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 1.5e-11 74.3 47 72.3
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 2.6e-11 73.6 92 41.3
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 7.6e-11 72.0 165 30.9
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 1.0e-07 61.6 67 53.7


User provided reference genes

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