Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 3.0e-174 615.1 326 100.0
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.6e-172 609.4 327 99.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.2e-170 603.2 327 98.5
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.5e-153 543.9 323 89.2
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.2e-151 540.0 327 87.8
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.4e-147 525.8 326 85.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 7.2e-128 461.1 321 75.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 6.3e-124 448.0 323 76.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 4.1e-123 445.3 321 71.7
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.7e-122 442.6 322 74.5
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.0e-121 440.7 321 72.0
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.5e-120 436.8 322 71.4
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.7e-119 431.8 321 71.7
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 6.1e-119 431.4 321 70.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 5.2e-118 428.3 321 70.7
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 1.5e-117 426.8 322 72.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 6.3e-116 421.4 313 73.5
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.1e-115 418.7 323 70.9
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.1e-115 418.7 324 69.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 5.4e-115 418.3 321 69.5
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.7e-114 416.0 325 69.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 2.7e-114 416.0 322 69.3
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 3.5e-114 415.6 320 69.7
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 7.8e-114 414.5 330 67.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.7e-113 413.3 327 68.5
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.7e-113 413.3 321 70.1
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.3e-113 412.9 332 69.0
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 3.8e-113 412.1 326 69.0
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 5.0e-113 411.8 331 68.6
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.1e-112 410.6 321 70.1
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.1e-112 410.6 324 67.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.1e-112 410.6 320 68.1
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.1e-112 410.6 321 69.8
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.5e-112 409.5 326 67.2
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 3.3e-112 409.1 326 69.0
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 5.6e-112 408.3 343 66.5
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.6e-111 406.8 321 67.9
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.6e-111 406.8 322 69.9
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 8.0e-111 404.4 322 67.7
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 8.0e-111 404.4 322 66.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.3e-110 402.9 322 69.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 4.0e-110 402.1 328 66.5
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 8.9e-110 401.0 328 65.5
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 8.9e-110 401.0 328 67.4
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.5e-109 400.2 326 67.5
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.6e-109 399.4 329 65.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.6e-109 399.4 328 66.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.6e-109 399.4 320 66.2
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.4e-109 399.1 328 65.9
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 7.5e-109 397.9 332 64.5
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 9.8e-109 397.5 323 65.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.3e-108 397.1 221 93.2
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.9e-108 396.0 326 66.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 3.7e-108 395.6 320 65.3
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 4.9e-108 395.2 322 64.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 6.4e-108 394.8 261 77.0
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 6.4e-108 394.8 354 63.3
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 4.1e-107 392.1 324 66.4
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 5.4e-107 391.7 314 68.5
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 7.0e-107 391.3 267 73.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.2e-106 390.6 322 65.5
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.2e-106 390.6 248 81.0
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.6e-106 390.2 317 68.1
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 3.5e-106 389.0 288 69.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 3.0e-105 386.0 341 61.9
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.0e-105 386.0 326 64.4
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.9e-105 385.6 288 69.4
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 5.0e-105 385.2 307 65.8
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.1e-104 384.0 325 66.2
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.9e-104 383.3 264 72.3
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.5e-104 382.9 326 65.0
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 7.3e-104 381.3 368 59.8
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.2e-103 380.6 309 66.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.7e-103 378.6 298 66.8
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 4.7e-103 378.6 262 73.3
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 8.0e-103 377.9 322 64.3
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.4e-102 377.1 288 70.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 2.3e-102 376.3 258 74.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 8.9e-102 374.4 352 58.5
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 9.8e-101 370.9 249 75.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.2e-100 369.8 324 63.9
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 6.4e-100 368.2 329 59.9
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.9e-99 366.7 235 78.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 3.2e-99 365.9 320 60.0
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 4.1e-99 365.5 235 79.1
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 6.6e-97 358.2 331 59.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.5e-96 356.3 342 59.6
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 8.1e-95 351.3 325 60.0
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 3.1e-94 349.4 320 60.6
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.5e-93 347.1 290 64.8
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.5e-90 335.9 331 60.1
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.0e-90 335.1 249 67.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-88 330.9 255 67.8
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.7e-82 309.7 218 75.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 9.6e-80 301.2 253 64.8
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 6.9e-78 295.0 215 67.9
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.6e-77 291.6 190 76.8
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 9.9e-77 291.2 271 58.3
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 4.9e-76 288.9 259 56.0
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.7e-74 283.1 223 64.6
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 3.6e-71 272.7 259 53.3
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.6e-71 272.7 300 49.7
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 2.4e-70 270.0 259 60.2
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.8e-63 246.5 263 47.5
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.5e-61 240.7 275 48.4
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.0e-61 240.4 249 52.2
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.6e-61 238.4 251 51.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.4e-60 235.0 255 47.8
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 3.8e-52 209.5 268 42.9
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 8.2e-47 191.8 128 75.8
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.1e-42 177.2 258 40.7
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 6.3e-39 165.6 125 69.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.1e-38 163.3 163 58.9
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 4.5e-37 159.5 246 36.6
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 6.7e-33 145.6 317 38.8
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.0e-28 131.7 86 80.2
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 3.3e-24 116.7 244 29.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 7.0e-22 109.0 270 33.0
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 7.5e-08 62.4 69 62.3
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 7.5e-08 62.4 31 100.0
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.1e-06 56.6 52 50.0


User provided reference genes

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