Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 7.4e-228 793.5 391 100.0
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 1.6e-105 387.1 390 55.4
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 7.9e-105 384.8 342 61.7
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 9.0e-101 371.3 393 55.0
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 9.0e-101 371.3 394 54.8
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.5e-100 370.5 388 53.9
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 3.2e-98 362.8 346 55.5
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 2.7e-97 359.8 347 54.8
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.1e-96 355.5 299 59.9
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 6.3e-94 348.6 296 58.4
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 8.2e-94 348.2 288 61.1
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 2.4e-93 346.7 335 54.0
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 4.1e-93 345.9 319 56.1
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 4.1e-93 345.9 340 54.4
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 5.3e-93 345.5 335 54.0
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 6.9e-93 345.1 334 53.6
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 6.9e-93 345.1 300 59.7
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 6.9e-93 345.1 309 57.6
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 4.5e-92 342.4 346 52.9
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.3e-91 340.9 300 58.7
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.8e-91 339.3 320 54.7
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.8e-91 339.3 319 54.5
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 8.5e-91 338.2 359 50.4
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 1.4e-90 337.4 366 48.6
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.4e-90 337.4 293 57.7
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.9e-90 337.0 310 55.5
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.2e-90 336.3 366 50.5
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 9.4e-90 334.7 360 50.0
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.2e-89 334.3 381 47.0
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.2e-89 334.3 302 56.3
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.6e-89 334.0 380 50.5
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 4.6e-89 332.4 336 52.4
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 7.9e-89 331.6 323 53.6
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 7.9e-89 331.6 305 57.7
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.0e-88 331.3 296 54.7
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.0e-88 331.3 312 55.1
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 1.0e-88 331.3 354 53.1
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 3.9e-88 329.3 331 51.4
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 6.7e-88 328.6 349 49.6
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 8.8e-88 328.2 335 51.6
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 1.5e-87 327.4 334 51.5
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.0e-87 327.0 298 54.4
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 2.0e-87 327.0 302 57.0
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 2.5e-87 326.6 342 52.9
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 2.5e-87 326.6 408 46.3
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.5e-87 326.6 391 48.1
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 3.3e-87 326.2 322 50.6
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 3.3e-87 326.2 319 53.3
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 5.7e-87 325.5 397 45.6
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 5.7e-87 325.5 400 47.0
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 7.4e-87 325.1 336 52.1
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 7.4e-87 325.1 302 54.6
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 9.7e-87 324.7 352 51.4
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.7e-86 323.9 385 48.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.8e-86 323.2 366 48.4
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 2.8e-86 323.2 302 53.3
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 2.8e-86 323.2 366 47.8
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 4.8e-86 322.4 283 56.2
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 4.8e-86 322.4 403 45.9
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 8.2e-86 321.6 368 46.7
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.4e-85 320.9 352 50.6
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.4e-85 320.9 380 47.1
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 2.4e-85 320.1 298 53.7
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 3.1e-85 319.7 300 54.7
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 5.3e-85 318.9 372 47.0
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 5.3e-85 318.9 298 53.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 6.9e-85 318.5 300 54.3
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 9.1e-85 318.2 329 53.2
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.2e-84 317.8 377 47.2
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 3.4e-84 316.2 346 49.4
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 5.9e-84 315.5 304 53.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 2.2e-83 313.5 314 51.0
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.9e-83 313.2 298 52.3
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 2.9e-83 313.2 298 52.3
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.4e-82 310.8 298 51.3
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 9.4e-82 308.1 325 49.8
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.7e-81 305.8 289 55.0
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 6.1e-81 305.4 384 47.4
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 7.9e-81 305.1 308 51.6
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 8.8e-80 301.6 298 50.3
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 2.0e-79 300.4 308 52.3
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 2.0e-79 300.4 347 45.8
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 3.7e-78 296.2 338 50.3
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 4.7e-73 279.3 301 47.5
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 4.0e-72 276.2 306 49.0
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 2.0e-71 273.9 383 44.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 5.7e-71 272.3 246 56.9
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 8.2e-70 268.5 253 55.3
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 2.7e-68 263.5 284 49.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 8.8e-64 248.4 232 54.7
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.5e-63 247.7 260 50.8
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.9e-58 230.7 338 40.5
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.9e-51 206.8 333 37.5
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 1.6e-49 201.1 321 38.0
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.7e-46 191.0 159 57.2
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 2.5e-42 177.2 363 34.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 7.3e-42 175.6 304 35.5
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 2.3e-40 170.6 170 54.7
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 7.5e-39 165.6 303 32.3
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.9e-38 163.7 170 50.0
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.7e-27 127.9 184 41.8
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.5e-26 124.0 128 52.3
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 1.2e-23 115.2 105 55.2
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 3.2e-21 107.1 284 29.6
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 5.4e-21 106.3 132 48.5
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.6e-20 103.2 89 56.2
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 5.1e-19 99.8 289 28.0
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 3.6e-17 93.6 103 51.5


User provided reference genes

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