Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.2e-83 313.2 162 100.0
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 9.4e-44 180.6 126 77.0
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.5e-41 173.3 138 69.6
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.7e-40 169.9 134 71.6
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 6.3e-40 167.9 138 67.4
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 4.1e-39 165.2 140 67.1
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 6.9e-39 164.5 142 66.2
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 9.1e-39 164.1 140 66.4
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.5e-38 161.8 137 67.9
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 4.5e-38 161.8 143 67.1
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 5.9e-38 161.4 123 71.5
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 5.9e-38 161.4 144 64.6
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.0e-37 160.6 94 86.2
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.3e-37 160.2 134 67.2
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.3e-37 160.2 135 64.4
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.7e-37 159.8 134 67.2
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 2.2e-37 159.5 108 76.9
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.9e-37 159.1 138 63.8
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.9e-37 159.1 99 80.8
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 5.0e-37 158.3 138 65.2
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 5.0e-37 158.3 139 66.9
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.1e-36 157.1 144 63.2
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.1e-36 157.1 139 66.9
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.4e-36 156.8 140 66.4
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.4e-36 156.8 90 88.9
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.4e-36 156.8 133 64.7
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.4e-36 156.8 110 74.5
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 2.5e-36 156.0 102 81.4
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 2.5e-36 156.0 90 86.7
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 3.2e-36 155.6 142 63.4
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.2e-36 155.6 89 87.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 4.2e-36 155.2 90 86.7
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 5.5e-36 154.8 96 82.3
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 7.2e-36 154.5 92 84.8
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 7.2e-36 154.5 95 84.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 9.4e-36 154.1 94 86.2
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 9.4e-36 154.1 141 61.7
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.2e-35 153.7 105 76.2
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.6e-35 153.3 101 77.2
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 2.1e-35 152.9 140 64.3
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.1e-35 152.9 95 83.2
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.1e-35 152.9 122 68.0
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.7e-35 152.5 94 81.9
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 3.6e-35 152.1 95 81.1
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.6e-35 152.1 96 82.3
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.7e-35 151.8 94 83.0
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 6.1e-35 151.4 87 87.4
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 6.1e-35 151.4 134 63.4
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 7.9e-35 151.0 143 62.2
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.0e-34 150.6 136 64.0
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.0e-34 150.6 134 63.4
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 1.4e-34 150.2 136 64.7
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.8e-34 149.8 92 82.6
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.3e-34 149.4 94 78.7
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 2.3e-34 149.4 137 65.7
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.0e-34 149.1 90 84.4
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 5.1e-34 148.3 91 79.1
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 6.7e-34 147.9 99 75.8
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 6.7e-34 147.9 138 58.7
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 8.8e-34 147.5 134 59.7
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 8.8e-34 147.5 95 80.0
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.1e-33 147.1 135 65.2
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 1.5e-33 146.7 94 77.7
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.5e-33 146.7 94 80.9
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.5e-33 146.7 137 60.6
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.5e-33 146.7 138 60.1
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 1.5e-33 146.7 150 54.7
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 2.0e-33 146.4 95 78.9
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 3.3e-33 145.6 94 79.8
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.3e-33 145.6 94 79.8
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 3.3e-33 145.6 141 61.7
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.4e-33 145.2 94 79.8
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 5.7e-33 144.8 92 79.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 7.4e-33 144.4 90 80.0
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 2.2e-32 142.9 100 74.0
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.2e-32 142.9 100 74.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.2e-32 142.9 100 74.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 2.2e-32 142.9 100 74.0
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 2.2e-32 142.9 113 69.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.2e-32 142.9 93 77.4
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 6.3e-32 141.4 133 57.9
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 8.2e-32 141.0 85 81.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 8.2e-32 141.0 85 81.2
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.8e-31 139.8 135 59.3
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.8e-31 139.8 83 83.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.4e-31 139.4 95 71.6
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 3.1e-31 139.0 140 58.6
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 3.1e-31 139.0 138 56.5
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 4.1e-31 138.7 99 71.7
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 9.1e-31 137.5 83 83.1
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 2.0e-30 136.3 134 52.2
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.0e-30 136.3 84 81.0
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 4.5e-30 135.2 85 80.0
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 5.9e-30 134.8 86 82.6
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.3e-29 133.7 84 76.2
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.1e-28 130.6 130 61.5
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.5e-28 130.2 82 79.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.5e-28 130.2 82 78.0
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.9e-28 129.8 96 68.8
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 4.2e-28 128.6 100 66.0
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 5.5e-28 128.3 87 71.3
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.8e-26 123.2 118 59.3
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.7e-21 106.7 93 69.9
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.2e-16 89.7 46 87.0
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 7.0e-15 84.7 46 82.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 8.3e-08 61.2 85 42.4
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 4.1e-07 58.9 83 50.6


User provided reference genes

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