Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold753G53552 Striga asiatica HOM05D004811 ORTHO05D006888 2.1e-56 222.2 123 100.0
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 6.2e-32 141.0 119 69.7
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 3.8e-29 131.7 123 63.4
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 3.9e-26 121.7 119 60.5
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 3.9e-26 121.7 124 62.1
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 5.1e-26 121.3 130 59.2
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 1.1e-25 120.2 130 60.0
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 1.1e-25 120.2 124 62.1
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 2.5e-25 119.0 124 62.1
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 9.7e-25 117.1 125 60.0
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 1.6e-24 116.3 126 61.1
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 4.8e-24 114.8 120 59.2
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 6.3e-24 114.4 125 60.8
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 8.2e-24 114.0 136 56.6
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 8.2e-24 114.0 136 56.6
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 8.2e-24 114.0 130 56.9
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 5.3e-23 111.3 136 55.1
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 2.0e-22 109.4 130 57.7
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 2.6e-22 109.0 133 55.6
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 3.4e-22 108.6 128 55.5
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 3.4e-22 108.6 126 54.8
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 4.5e-22 108.2 130 56.9
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 1.0e-21 107.1 130 57.7
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 1.0e-21 107.1 128 54.7
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.3e-21 106.7 128 57.0
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 2.2e-21 105.9 136 52.9
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 3.8e-21 105.1 131 51.9
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 1.1e-20 103.6 129 55.0
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 1.9e-20 102.8 107 59.8
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 2.5e-20 102.4 137 54.0
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 3.2e-20 102.1 127 51.2
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 7.2e-20 100.9 130 53.8
TPR.G39924 Trifolium pratense HOM05D004811 ORTHO05D006888 9.3e-20 100.5 127 52.8
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 1.2e-19 100.1 146 50.0
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.2e-19 100.1 130 56.2
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 3.6e-19 98.6 127 51.2
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 4.6e-19 98.2 129 52.7
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 7.9e-19 97.4 130 51.5
Cpa.g.sc111.45 Carica papaya HOM05D004811 ORTHO05D006888 1.0e-18 97.1 129 51.9
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 1.0e-18 97.1 129 51.9
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 1.0e-18 97.1 129 51.9
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 1.0e-18 97.1 130 49.2
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 1.8e-18 96.3 127 52.0
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 3.0e-18 95.5 129 49.6
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 3.0e-18 95.5 131 51.9
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 8.8e-18 94.0 130 49.2
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 8.8e-18 94.0 125 48.0
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.5e-17 93.2 129 49.6
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 1.5e-17 93.2 128 49.2
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 1.9e-17 92.8 131 48.9
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 2.5e-17 92.4 128 48.4
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 2.5e-17 92.4 127 48.8
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 3.3e-17 92.0 119 52.9
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 3.3e-17 92.0 133 51.1
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.3e-17 92.0 133 51.1
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 3.3e-17 92.0 140 47.1
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.7e-17 91.3 133 51.1
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 9.7e-17 90.5 140 45.7
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 2.2e-16 89.4 130 47.7
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.2e-16 89.4 133 50.4
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 2.2e-16 89.4 127 48.8
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 3.7e-16 88.6 138 46.4
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.8e-16 88.2 133 51.9
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 1.1e-15 87.0 143 45.5
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 1.4e-15 86.7 138 45.7
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 2.4e-15 85.9 131 48.9
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 3.1e-15 85.5 132 45.5
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 4.1e-15 85.1 132 47.0
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 4.1e-15 85.1 134 49.3
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 6.9e-15 84.3 132 46.2
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 1.2e-14 83.6 129 46.5
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 1.2e-14 83.6 126 44.4
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 3.4e-14 82.0 143 42.7
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 5.9e-14 81.3 120 46.7
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 1.3e-13 80.1 130 44.6
Hund15156 Selenicereus undatus HOM05D004811 ORTHO05D006888 5.0e-13 78.2 127 43.3
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 5.0e-13 78.2 127 44.9
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 1.4e-12 76.6 129 41.9
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 2.5e-12 75.9 133 43.6
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 3.2e-12 75.5 107 48.6
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 4.2e-12 75.1 124 41.9
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 5.5e-12 74.7 122 43.4
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 5.5e-12 74.7 122 43.4
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 5.5e-12 74.7 135 45.9
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 5.5e-12 74.7 122 43.4
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 9.4e-12 73.9 122 43.4
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 9.4e-12 73.9 122 43.4
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.6e-11 73.2 127 44.1
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 2.1e-11 72.8 122 43.4
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 2.1e-11 72.8 124 43.5
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 2.7e-11 72.4 122 43.4
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 2.7e-11 72.4 123 43.1
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 2.7e-11 72.4 129 43.4
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 2.3e-10 69.3 128 42.2
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 6.3e-08 61.2 97 42.3
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 8.2e-08 60.8 129 40.3
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 5.3e-07 58.2 121 38.0


User provided reference genes

Program Settings