Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 9.3e-214 746.5 353 100.0
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 5.3e-92 342.0 324 58.6
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.4e-28 130.6 359 31.5
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 1.2e-27 128.3 308 30.5
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 6.0e-27 125.9 313 30.4
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 8.6e-26 122.1 308 29.9
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 1.1e-25 121.7 309 31.4
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 5.6e-25 119.4 350 31.7
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 9.5e-25 118.6 323 29.1
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 2.8e-24 117.1 313 29.4
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 6.8e-23 112.5 310 30.6
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.0e-22 110.9 364 26.9
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 2.6e-22 110.5 324 30.2
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.4e-22 109.8 329 29.8
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 7.1e-20 102.4 305 27.9
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 7.1e-20 102.4 310 28.1
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 1.6e-19 101.3 279 30.8
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 2.1e-19 100.9 332 27.1
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.6e-19 99.8 330 26.7
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.7e-18 97.8 319 25.4
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.0e-18 97.1 326 26.1
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.1e-18 96.3 325 27.1
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.6e-18 95.5 297 27.9
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.9e-17 94.4 312 28.5
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 2.5e-17 94.0 321 29.6
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 9.5e-17 92.0 327 26.9
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 9.5e-17 92.0 321 29.3
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.2e-16 91.7 324 26.5
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.1e-16 90.9 327 26.0
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.8e-14 82.8 315 25.7
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 9.9e-14 82.0 319 28.2
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 1.3e-13 81.6 314 28.7
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.4e-12 77.4 287 23.3
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 3.2e-12 77.0 237 28.3
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.1e-12 76.6 357 22.7
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 7.1e-12 75.9 244 31.1
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-11 74.7 325 24.9
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.3e-10 71.6 134 35.1
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-10 71.6 209 28.7
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 2.3e-10 70.9 322 25.2
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.3e-10 70.9 325 24.6
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.0e-10 70.5 352 25.6
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.9e-10 70.1 322 23.9
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 5.1e-10 69.7 329 20.1
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.6e-10 69.3 154 29.2
MBI19_g34542_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.6e-10 69.3 219 28.8
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.7e-10 68.9 123 33.3
Ciclev10010650m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-09 67.4 298 24.2
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 2.1e-08 64.3 111 29.7
PGSC0003DMG400040058 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.6e-08 63.5 331 22.7
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.2e-08 62.8 237 26.2
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-07 61.6 342 24.0
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 2.4e-07 60.8 121 28.1
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.1e-07 60.5 320 21.9
Dinv23118 Davidia involucrata HOM05D008995 ORTHO05D000074 3.1e-07 60.5 283 25.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.1e-07 60.5 111 35.1
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 3.1e-07 60.5 113 30.1
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 3.1e-07 60.5 113 30.1
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.1e-07 60.5 134 29.1
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 4.0e-07 60.1 62 48.4
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 9.0e-07 58.9 111 27.9
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.0e-07 58.9 365 22.7
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.0e-07 58.9 339 24.2
FvH4_5g02180 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-06 58.2 140 33.6
FAN17G0578 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-06 58.2 139 30.2
RcHm_v2.0_Chr4g0424551 Rosa chinensis HOM05D000151 ORTHO05D000074 2.0e-06 57.8 164 29.3
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 57.4 118 33.1
Migut.L01024 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.4e-06 57.0 60 50.0
MD05G1250900 Malus domestica HOM05D000151 ORTHO05D000074 3.4e-06 57.0 123 32.5
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 3.4e-06 57.0 105 28.6
COL.COLO4_22279 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.4e-06 56.6 113 30.1
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 5.8e-06 56.2 332 23.5
Peaxi162Scf00174g01118 Petunia axillaris HOM05D000151 ORTHO05D000074 5.8e-06 56.2 133 31.6
Psat2g125280 Pisum sativum HOM05D000151 ORTHO05D000074 5.8e-06 56.2 292 22.9
Solyc03g115420.3 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.8e-06 56.2 283 23.7
PGSC0003DMG400012867 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.8e-06 56.2 93 35.5
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.6e-06 55.8 137 28.5
Peaxi162Scf00329g00017 Petunia axillaris HOM05D000151 ORTHO05D000074 7.6e-06 55.8 78 38.5
FAN14G3774 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.9e-06 55.5 108 32.4


User provided reference genes

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