Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold601G53143 Striga asiatica HOM05D010691 ORTHO05D008628 6.9e-153 543.9 266 100.0
CSS0021922 Camellia sinensis var. sinensis HOM05D011245 ORTHO05D008628 1.6e-11 74.3 78 47.4
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 2.0e-11 73.9 130 35.4
Actinidia20119 Actinidia chinensis HOM05D010691 ORTHO05D008628 1.3e-10 71.2 64 51.6
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.9e-10 70.1 71 50.7
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 3.8e-10 69.7 49 63.3
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 2.5e-09 67.0 61 54.1
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 5.5e-09 65.9 58 55.2
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.2e-09 65.5 48 60.4
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.2e-09 65.5 48 60.4
CSS0046152 Camellia sinensis var. sinensis HOM05D015870 ORTHO05D008628 1.4e-07 61.2 62 48.4
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.8e-07 60.8 53 54.7
MBI05_g38502_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 2.6e-06 57.0 63 41.3
MBI13_g19838_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D008628 5.7e-06 55.8 102 34.3
PGR004G2889 Punica granatum HOM05D000047 ORTHO05D007790 5.7e-06 55.8 96 37.5
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 9.7e-06 55.1 46 56.5
CSS0041198 Camellia sinensis var. sinensis HOM05D014704 ORTHO05D008628 9.7e-06 55.1 41 58.5
PGR102G2492 Punica granatum HOM05D000047 ORTHO05D007790 9.7e-06 55.1 123 34.1


User provided reference genes

Program Settings