Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 2.2e-140 502.3 249 100.0
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 9.8e-93 344.0 267 70.4
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 3.4e-77 292.4 265 63.8
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 8.4e-76 287.7 267 59.2
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 3.2e-75 285.8 240 63.3
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 7.1e-75 284.6 271 59.4
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 7.1e-75 284.6 264 62.1
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.6e-74 283.5 275 60.7
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.6e-74 283.5 340 51.5
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.1e-74 283.1 239 64.4
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 2.3e-73 279.6 271 58.7
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 2.3e-73 279.6 270 58.5
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 6.6e-73 278.1 270 58.5
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 6.6e-73 278.1 267 58.4
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.1e-72 277.3 271 58.7
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 1.5e-72 276.9 269 56.9
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 1.5e-72 276.9 263 59.7
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 3.3e-72 275.8 263 59.7
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 3.3e-72 275.8 270 58.9
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 3.3e-72 275.8 273 60.1
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 5.6e-72 275.0 270 58.1
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 5.6e-72 275.0 259 60.6
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 2.1e-71 273.1 272 57.0
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.8e-71 272.7 272 57.0
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 4.7e-71 271.9 272 58.8
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 6.2e-71 271.6 262 59.2
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 8.1e-71 271.2 271 58.3
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 1.4e-70 270.4 222 62.6
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 2.4e-70 269.6 236 61.4
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-70 269.2 213 63.4
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-70 269.2 213 63.4
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 5.2e-70 268.5 277 57.0
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 5.2e-70 268.5 195 69.2
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 5.2e-70 268.5 269 58.0
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 5.2e-70 268.5 270 59.3
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 9.0e-70 267.7 275 58.2
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 1.2e-69 267.3 278 57.2
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 1.5e-69 266.9 211 65.4
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.5e-69 266.9 278 55.0
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 1.5e-69 266.9 296 54.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.6e-69 266.2 270 57.8
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 3.4e-69 265.8 270 57.8
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 3.4e-69 265.8 269 57.2
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 4.4e-69 265.4 272 57.7
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 4.4e-69 265.4 270 55.9
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 5.8e-69 265.0 279 54.1
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.3e-68 263.8 188 67.6
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 1.3e-68 263.8 235 59.1
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.3e-68 263.8 187 71.1
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 6.4e-68 261.5 266 54.1
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 6.4e-68 261.5 268 54.9
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 1.1e-67 260.8 256 55.1
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 1.1e-67 260.8 276 56.2
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 1.4e-67 260.4 272 54.8
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.4e-67 260.4 271 53.9
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.4e-67 260.4 271 53.9
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 1.9e-67 260.0 272 52.9
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.9e-67 260.0 188 69.1
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.9e-67 260.0 269 54.3
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.4e-67 259.6 224 62.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 3.2e-67 259.2 270 55.6
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 5.4e-67 258.5 243 58.0
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 7.1e-67 258.1 199 64.8
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 9.3e-67 257.7 237 59.9
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 4.6e-66 255.4 218 59.6
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 6.0e-66 255.0 202 65.8
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 7.8e-66 254.6 197 66.0
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 1.0e-65 254.2 273 53.5
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 1.3e-65 253.8 175 71.4
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.7e-65 253.4 236 57.2
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 3.0e-65 252.7 276 55.1
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 5.1e-65 251.9 221 59.3
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.1e-64 250.8 234 57.3
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 2.5e-64 249.6 254 54.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 3.3e-64 249.2 212 60.8
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 7.3e-64 248.1 251 53.8
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.3e-63 247.3 185 67.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.3e-63 247.3 269 55.0
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 4.0e-62 242.3 229 56.8
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 9.0e-62 241.1 229 56.3
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.2e-61 240.7 230 57.0
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 2.0e-61 240.0 231 58.0
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 2.6e-61 239.6 236 54.2
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.9e-60 236.1 253 52.2
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.2e-58 230.7 193 60.6
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 8.7e-57 224.6 346 43.6
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 7.4e-56 221.5 185 60.0
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 6.2e-55 218.4 142 72.5
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 1.6e-50 203.8 189 55.0
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 1.3e-49 200.7 186 55.9
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.9e-48 196.8 226 52.2
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 4.3e-48 195.7 182 58.8
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 4.3e-48 195.7 226 50.4
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.3e-47 194.1 220 51.4
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.6e-47 193.7 157 59.9
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 1.4e-46 190.7 157 60.5
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.4e-46 189.9 187 51.9
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 1.0e-41 174.5 189 52.4
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.4e-38 164.1 161 54.7
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.8e-38 163.7 193 45.6
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 4.1e-38 162.5 180 50.0
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 9.0e-38 161.4 134 56.7
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 6.1e-34 148.7 96 72.9
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 6.7e-33 145.2 93 71.0
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 8.8e-33 144.8 149 59.7
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-32 144.1 94 71.3
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.7e-32 141.4 166 51.8
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.7e-31 140.6 144 56.9
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 3.7e-31 139.4 94 70.2
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 3.7e-31 139.4 93 71.0
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 9.1e-30 134.8 93 71.0
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 7.7e-29 131.7 94 67.0
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 7.7e-29 131.7 94 67.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 2.5e-27 126.7 115 57.4
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 1.6e-26 124.0 64 87.5
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 2.0e-24 117.1 68 77.9
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 5.7e-24 115.5 136 53.7
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 6.3e-23 112.1 86 65.1
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 2.7e-18 96.7 153 37.3
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 9.7e-16 88.2 163 38.7


User provided reference genes

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