Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 8.6e-168 593.6 299 100.0
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 7.0e-154 547.4 299 91.3
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 3.3e-151 538.5 296 88.5
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 5.6e-151 537.7 299 89.3
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 4.7e-150 534.6 296 89.9
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.5e-148 529.6 296 87.5
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.4e-148 528.5 296 88.2
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 7.5e-148 527.3 296 88.9
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 7.5e-148 527.3 296 88.2
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 7.5e-148 527.3 297 87.5
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.7e-147 526.2 296 87.5
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.2e-147 525.8 296 87.2
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 2.2e-147 525.8 296 86.5
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 4.9e-147 524.6 296 86.1
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 4.9e-147 524.6 296 87.5
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 6.4e-147 524.2 286 91.6
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 8.3e-147 523.9 297 86.9
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 8.3e-147 523.9 296 87.2
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 8.3e-147 523.9 296 87.2
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 8.3e-147 523.9 296 87.2
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 1.1e-146 523.5 296 87.2
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-146 522.7 296 85.8
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.9e-146 522.7 296 86.5
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 2.4e-146 522.3 296 87.5
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 2.4e-146 522.3 297 87.5
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 4.1e-146 521.5 295 86.8
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 7.0e-146 520.8 296 85.8
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 7.0e-146 520.8 297 87.2
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 7.0e-146 520.8 296 86.5
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 7.0e-146 520.8 296 86.1
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 9.2e-146 520.4 296 86.5
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 9.2e-146 520.4 296 86.5
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 296 86.1
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 1.2e-145 520.0 295 86.4
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.6e-145 519.6 296 85.8
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.5e-145 518.5 295 86.4
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 3.5e-145 518.5 296 86.1
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 6.0e-145 517.7 297 86.9
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 6.0e-145 517.7 293 86.7
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 1.0e-144 516.9 294 87.1
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 1.7e-144 516.2 296 85.5
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 2.3e-144 515.8 294 85.7
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.3e-144 515.8 297 86.5
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 3.0e-144 515.4 296 85.5
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 3.0e-144 515.4 296 85.5
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 3.0e-144 515.4 296 85.5
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 3.9e-144 515.0 294 85.0
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 3.9e-144 515.0 296 84.8
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 3.9e-144 515.0 296 85.5
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 6.6e-144 514.2 296 84.5
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 6.6e-144 514.2 324 80.6
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 8.6e-144 513.8 293 86.7
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 8.6e-144 513.8 295 84.4
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.1e-143 513.5 296 84.8
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.1e-143 513.5 296 84.8
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 1.1e-143 513.5 296 85.1
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 1.5e-143 513.1 296 85.1
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.5e-143 513.1 294 86.1
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 1.9e-143 512.7 297 85.2
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 1.9e-143 512.7 293 86.7
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 2.5e-143 512.3 296 84.8
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 3.3e-143 511.9 296 85.5
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 4.3e-143 511.5 293 86.3
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 4.3e-143 511.5 293 86.7
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 5.6e-143 511.1 296 84.8
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 5.6e-143 511.1 296 84.8
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 5.6e-143 511.1 296 84.8
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 5.6e-143 511.1 296 85.1
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 5.6e-143 511.1 296 85.8
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 9.5e-143 510.4 296 83.8
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 9.5e-143 510.4 296 83.8
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 9.5e-143 510.4 296 84.5
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 1.2e-142 510.0 297 84.5
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.2e-142 510.0 296 84.5
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 2.1e-142 509.2 296 84.5
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 2.8e-142 508.8 296 84.1
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 2.8e-142 508.8 296 83.8
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 3.6e-142 508.4 295 84.4
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 3.6e-142 508.4 296 85.1
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 4.7e-142 508.1 294 84.0
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 4.7e-142 508.1 296 85.1
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 6.2e-142 507.7 296 83.4
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-141 506.5 303 81.2
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.4e-141 506.5 296 83.8
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 2.3e-141 505.8 317 80.1
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.2e-140 503.4 295 83.1
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 1.2e-140 503.4 281 89.3
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.0e-140 502.7 360 72.5
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 5.8e-140 501.1 297 84.2
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.3e-139 500.0 295 84.4
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 3.7e-139 498.4 297 83.5
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 6.4e-139 497.7 300 83.0
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 4.6e-137 491.5 280 85.0
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.6e-137 491.5 306 82.4
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 4.6e-137 491.5 306 82.4
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 6.0e-137 491.1 296 81.8
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 6.0e-137 491.1 278 88.1
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 7.8e-137 490.7 301 82.4
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 7.8e-137 490.7 296 82.8
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.0e-136 490.3 296 83.4
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 1.3e-136 490.0 296 82.8
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 1.3e-136 490.0 278 86.3
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.3e-136 490.0 280 86.1
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.7e-136 489.6 296 82.4
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 5.1e-136 488.0 280 85.7
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 1.1e-135 486.9 280 85.7
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.5e-135 486.5 296 81.8
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 1.5e-135 486.5 290 83.4
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.5e-135 485.7 276 86.6
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 3.3e-135 485.3 282 85.1
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 3.3e-135 485.3 288 84.4
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 5.6e-135 484.6 294 81.6
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 4.7e-134 481.5 267 89.5
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 6.2e-134 481.1 281 83.3
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.8e-133 479.6 317 78.5
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 6.8e-133 477.6 306 79.7
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 1.4e-130 469.9 280 85.0
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.4e-130 469.9 298 80.5
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 5.4e-130 468.0 282 83.3
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 2.1e-129 466.1 280 83.9
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.7e-129 465.7 296 79.7
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 1.0e-128 463.8 292 79.8
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 1.7e-128 463.0 296 79.1
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 7.3e-127 457.6 264 86.0
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 9.6e-127 457.2 264 86.0
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.6e-126 456.4 332 72.3
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 3.6e-126 455.3 263 86.7
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 3.1e-125 452.2 255 87.5
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 3.1e-125 452.2 288 77.1
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 6.4e-123 444.5 319 73.0
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 1.1e-122 443.7 276 79.0
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 4.6e-121 438.3 246 87.4
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.7e-120 436.4 295 71.5
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.7e-120 436.4 262 82.8
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 2.5e-119 432.6 250 86.0
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 2.6e-116 422.5 296 74.7
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 6.4e-115 417.9 391 59.6
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 4.8e-110 401.7 295 67.8
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 7.6e-108 394.4 283 73.1
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 9.3e-106 387.5 225 84.4
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 2.5e-98 362.8 191 89.0
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.2e-97 360.5 206 86.9
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.3e-94 350.5 408 51.7
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 3.1e-93 345.9 283 65.0
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 5.0e-91 338.6 184 88.0
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 1.2e-84 317.4 279 62.0
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 7.9e-81 304.7 286 58.7
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-75 287.0 169 79.3
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 3.6e-73 279.3 252 60.7
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.3e-67 260.8 192 70.3
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 3.8e-67 259.2 269 49.4
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-47 194.1 141 70.2
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-47 194.1 141 70.2
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 3.4e-47 193.0 201 55.7
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.3e-32 143.7 149 55.7
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 6.8e-32 142.1 124 64.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 4.0e-24 116.3 100 62.0
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 1.2e-23 114.8 72 69.4
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.2e-23 114.8 80 71.2
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 2.6e-23 113.6 64 87.5
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-21 107.5 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-21 107.5 88 63.6
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 6.8e-16 89.0 48 83.3
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 3.8e-14 83.2 46 84.8
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 2.1e-12 77.4 46 80.4
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 3.3e-10 70.1 89 49.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 3.3e-10 70.1 89 49.4
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 8.1e-09 65.5 39 84.6
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 2.0e-07 60.8 138 37.0
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-06 57.8 45 57.8


User provided reference genes

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