Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G17900 Striga asiatica HOM05D003391 ORTHO05D013251 2.6e-84 315.5 170 100.0
SGA_v2.0_scaffold62G21434 Striga asiatica HOM05D003391 ORTHO05D005563 1.8e-53 213.0 181 74.0
MSTRG.9187 Avicennia marina HOM05D003391 ORTHO05D005563 2.5e-39 166.0 181 57.5
MSTRG.27454 Avicennia marina HOM05D003391 ORTHO05D005563 3.3e-39 165.6 181 58.0
SalBow4G0334 Salvia bowleyana HOM05D003391 ORTHO05D005563 1.2e-38 163.7 184 59.8
Migut.F02007 Erythranthe guttata HOM05D003391 ORTHO05D005563 4.7e-38 161.8 181 58.0
Migut.F01784 Erythranthe guttata HOM05D003391 ORTHO05D005563 3.2e-34 149.1 181 55.8
unitig_899.g14436 Utricularia gibba HOM05D003391 ORTHO05D005563 4.6e-33 145.2 178 52.2
Hund02122 Selenicereus undatus HOM05D003391 ORTHO05D005563 2.3e-29 132.9 146 55.5
AUR62023891 Chenopodium quinoa HOM05D003391 ORTHO05D005563 4.0e-29 132.1 146 52.1
Sabra16G0023000 Salix brachista HOM05D003391 ORTHO05D005563 5.2e-29 131.7 179 48.0
Sabra16G0029200 Salix brachista HOM05D003391 ORTHO05D005563 5.2e-29 131.7 179 48.0
Potri.016G023000 Populus trichocarpa HOM05D003391 ORTHO05D005563 7.6e-28 127.9 179 46.9
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 9.9e-28 127.5 181 48.6
Manes.01G037700 Manihot esculenta HOM05D003391 ORTHO05D005563 1.3e-27 127.1 178 46.1
Oeu033843.4 Olea europaea HOM05D003391 ORTHO05D005563 1.7e-27 126.7 181 48.6
TPR.G10474 Trifolium pratense HOM05D003391 ORTHO05D005563 4.9e-27 125.2 178 46.1
TWI74G0249 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 8.4e-27 124.4 178 46.1
CANSAT64G0651 Cannabis sativa HOM05D003391 ORTHO05D005563 1.1e-26 124.0 178 45.5
Nitab4.5_0007706g0020 Nicotiana tabacum HOM05D003391 ORTHO05D005563 1.4e-26 123.6 181 46.4
arahy.Tifrunner.gnm1.ann1.635YAA Arachis hypogaea HOM05D003391 ORTHO05D005563 1.9e-26 123.2 178 45.5
arahy.Tifrunner.gnm1.ann1.QTWQ8J Arachis hypogaea HOM05D003391 ORTHO05D005563 1.9e-26 123.2 178 45.5
QL04p065456 Quercus lobata HOM05D003391 ORTHO05D005563 1.9e-26 123.2 179 45.8
ClCG11G016680 Citrullus lanatus HOM05D003391 ORTHO05D005563 3.2e-26 122.5 178 46.1
CAN.G466.12 Capsicum annuum HOM05D003391 ORTHO05D005563 4.1e-26 122.1 181 45.9
Ca_11369_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 4.1e-26 122.1 178 45.5
Ca_30786_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 4.1e-26 122.1 178 45.5
MELO3C026391.2 Cucumis melo HOM05D003391 ORTHO05D005563 4.1e-26 122.1 178 45.5
Os01g0906200 Oryza sativa ssp. japonica HOM05D003391 ORTHO05D005563 4.1e-26 122.1 180 44.4
CSS0023421 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 5.4e-26 121.7 186 44.6
CsaV3_4G032190 Cucumis sativus L. HOM05D003391 ORTHO05D005563 5.4e-26 121.7 180 45.6
Solyc04g049490.3 Solanum lycopersicum HOM05D003391 ORTHO05D005563 7.1e-26 121.3 181 45.9
Sopen04g019460 Solanum pennellii HOM05D003391 ORTHO05D005563 7.1e-26 121.3 181 45.9
PGSC0003DMG402012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 7.1e-26 121.3 181 45.9
Glyma.09G018300 Glycine max HOM05D003391 ORTHO05D005563 9.2e-26 120.9 182 44.5
Nitab4.5_0000575g0140 Nicotiana tabacum HOM05D003391 ORTHO05D005563 9.2e-26 120.9 180 45.6
MD09G1135000 Malus domestica HOM05D003391 ORTHO05D005563 1.2e-25 120.6 178 46.6
arahy.Tifrunner.gnm1.ann1.MM6MID Arachis hypogaea HOM05D003391 ORTHO05D005563 1.6e-25 120.2 178 44.4
CiPaw.10G102000 Carya illinoinensis HOM05D003391 ORTHO05D005563 1.6e-25 120.2 178 43.8
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 2.1e-25 119.8 178 44.4
Dinv04581 Davidia involucrata HOM05D003391 ORTHO05D005563 2.1e-25 119.8 178 44.4
Gohir.D08G181000 Gossypium hirsutum HOM05D003391 ORTHO05D005563 2.1e-25 119.8 182 45.1
Gorai.004G190000 Gossypium raimondii HOM05D003391 ORTHO05D005563 2.1e-25 119.8 182 45.1
Lalb_Chr18g0057621 Lupinus albus HOM05D003391 ORTHO05D005563 2.1e-25 119.8 178 44.9
Lj6g0008612 Lotus japonicus HOM05D003391 ORTHO05D005563 2.7e-25 119.4 178 43.8
MD17G1124000 Malus domestica HOM05D003391 ORTHO05D005563 2.7e-25 119.4 180 45.6
Sed0012933 Sechium edule HOM05D003391 ORTHO05D005563 2.7e-25 119.4 180 44.4
Atru.chr13.1440 Acer truncatum HOM05D003391 ORTHO05D005563 3.5e-25 119.0 179 45.8
Atru.chr13.1465 Acer truncatum HOM05D003391 ORTHO05D005563 3.5e-25 119.0 179 45.8
Medtr2g028270 Medicago truncatula HOM05D003391 ORTHO05D005563 3.5e-25 119.0 178 43.8
Ciclev10028552m.g Citrus clementina HOM05D003391 ORTHO05D005563 4.6e-25 118.6 178 44.9
CAN.G998.14 Capsicum annuum HOM05D003391 ORTHO05D005563 6.0e-25 118.2 181 45.3
FvH4_6g40130 Fragaria vesca HOM05D003391 ORTHO05D005563 6.0e-25 118.2 178 44.9
Gohir.A08G160766 Gossypium hirsutum HOM05D003391 ORTHO05D005563 6.0e-25 118.2 182 44.5
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 42.7
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 42.7
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 42.7
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 42.7
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 42.7
Cpa.g.sc122.39 Carica papaya HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 44.9
Eucgr.L01917 Eucalyptus grandis HOM05D003391 ORTHO05D005563 1.0e-24 117.5 179 44.7
Lalb_Chr15g0088521 Lupinus albus HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 45.5
Nn7g37683 Nelumbo nucifera HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 48.9
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 1.0e-24 117.5 178 43.8
Ah.01g004390 Amaranthus hybridus HOM05D003391 ORTHO05D005563 1.3e-24 117.1 178 44.4
EL10Ac9g21140 Beta vulgaris HOM05D003391 ORTHO05D005563 1.3e-24 117.1 182 44.5
COL.COLO4_06714 Corchorus olitorius HOM05D003391 ORTHO05D005563 1.3e-24 117.1 182 43.4
TAR626G0891 Trochodendron aralioides HOM05D003391 ORTHO05D005563 1.3e-24 117.1 178 44.4
Duzib068G0467 Durio zibethinus HOM05D003391 ORTHO05D005563 1.7e-24 116.7 182 45.1
FAN05G0705 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.7e-24 116.7 178 44.4
FAN09G1714 Fragaria x ananassa HOM05D003391 ORTHO05D005563 1.7e-24 116.7 178 44.4
Aa31LG10G3790 Aethionema arabicum HOM05D003391 ORTHO05D005563 2.3e-24 116.3 179 45.3
Thecc.03G235800 Theobroma cacao HOM05D003391 ORTHO05D005563 2.3e-24 116.3 179 45.8
TWI77G0821 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 2.3e-24 116.3 178 44.9
CSS0020230 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 3.0e-24 115.9 180 46.1
Duzib084G0647 Durio zibethinus HOM05D003391 ORTHO05D005563 3.0e-24 115.9 185 43.2
Prupe.3G191700 Prunus persica HOM05D003391 ORTHO05D005563 3.0e-24 115.9 178 45.5
FAN02G4219 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.9e-24 115.5 178 44.4
PGR042G2316 Punica granatum HOM05D003391 ORTHO05D005563 5.1e-24 115.2 180 44.4
GSVIVG01016094001 Vitis vinifera HOM05D003391 ORTHO05D005563 5.1e-24 115.2 183 47.5
Aqoxy3G00251 Aquilegia oxysepala HOM05D003391 ORTHO05D005563 6.6e-24 114.8 180 43.9
Phvul.006G134000 Phaseolus vulgaris HOM05D003391 ORTHO05D005563 6.6e-24 114.8 178 43.3
MBI18_g28220_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 8.6e-24 114.4 180 45.0
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 1.1e-23 114.0 178 42.1
VMungo0540G0836 Vigna mungo HOM05D003391 ORTHO05D005563 1.1e-23 114.0 178 43.8
Glyma.15G124200 Glycine max HOM05D003391 ORTHO05D005563 1.5e-23 113.6 182 42.3
SHI21339 Sapria himalayana HOM05D003391 ORTHO05D005563 3.3e-23 112.5 181 44.2
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 5.6e-23 111.7 178 42.1
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 5.6e-23 111.7 178 42.1
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 7.3e-23 111.3 178 43.3
HPP92_006005 Vanilla planifolia HOM05D003391 ORTHO05D005563 7.3e-23 111.3 182 42.9
AUR62022296 Chenopodium quinoa HOM05D003391 ORTHO05D005563 9.6e-23 110.9 180 46.1
RcHm_v2.0_Chr2g0154761 Rosa chinensis HOM05D003391 ORTHO05D005563 9.6e-23 110.9 178 43.8
Cfa018226 Carpinus fangiana HOM05D003391 ORTHO05D005563 1.2e-22 110.5 178 47.8
FAN14G1902 Fragaria x ananassa HOM05D003391 ORTHO05D005563 2.1e-22 109.8 197 40.6
HanXRQChr03g0093781 Helianthus annuus HOM05D003391 ORTHO05D005563 2.1e-22 109.8 178 41.6
HanXRQChr04g0122221 Helianthus annuus HOM05D003391 ORTHO05D005563 2.8e-22 109.4 178 44.9
Actinidia37789 Actinidia chinensis HOM05D003391 ORTHO05D005563 3.6e-22 109.0 184 46.7
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 3.6e-22 109.0 178 42.7
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 4.7e-22 108.6 178 44.9
ATR1098G037 Amborella trichopoda HOM05D003391 ORTHO05D005563 3.1e-21 105.9 181 43.1
DCAR_003077 Daucus carota HOM05D003391 ORTHO05D005563 3.1e-21 105.9 180 48.3
ECA236G2623 Erigeron canadensis HOM05D003391 ORTHO05D005563 3.1e-21 105.9 178 43.3
Lsat_1_v5_gn_3_133361 Lactuca sativa HOM05D003391 ORTHO05D005563 3.1e-21 105.9 178 41.6
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 3.1e-21 105.9 179 42.5
Zm00001eb144220 Zea mays HOM05D003391 ORTHO05D005563 4.0e-21 105.5 185 46.5
Cc06_g14340 Coffea canephora HOM05D003391 ORTHO05D005563 5.2e-21 105.1 181 47.5
PSO675G3205 Papaver somniferum HOM05D003391 ORTHO05D005563 6.9e-21 104.8 178 41.0
SEGI_21663 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 6.9e-21 104.8 192 38.0
Hma1.2p1_0583F.1_g183000 Hydrangea macrophylla HOM05D003391 ORTHO05D005563 1.5e-20 103.6 186 44.1
PSO541G1880 Papaver somniferum HOM05D003391 ORTHO05D005563 2.0e-20 103.2 179 45.8
BolC3t21285H Brassica oleracea HOM05D003391 ORTHO05D005563 3.4e-20 102.4 190 40.5
SEGI_03483 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 9.9e-20 100.9 179 39.7
ECA240G2134 Erigeron canadensis HOM05D003391 ORTHO05D005563 1.3e-19 100.5 180 40.0
vmacro13793 Vaccinium macrocarpon HOM05D003391 ORTHO05D005563 2.2e-19 99.8 178 39.3
MBI18_g28219_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 1.9e-18 96.7 218 37.6
CARHR040520 Cardamine hirsuta HOM05D003391 ORTHO05D005563 4.2e-18 95.5 171 39.2
Peaxi162Scf00072g00087 Petunia axillaris HOM05D003391 ORTHO05D005563 4.2e-18 95.5 160 44.4
Lj7A654G26 Lonicera japonica HOM05D003391 ORTHO05D005563 7.1e-18 94.7 178 42.7
SGA_v2.0_scaffold94G28399 Striga asiatica HOM05D003391 ORTHO05D003123 7.1e-18 94.7 59 84.7
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 4.6e-17 92.0 157 41.4
Haze_17876 Corylus avellana HOM05D003391 ORTHO05D005563 4.6e-17 92.0 218 39.4
Lsat_1_v5_gn_7_7561 Lactuca sativa HOM05D003391 ORTHO05D005563 2.5e-15 86.3 186 41.4
Dinv10208 Davidia involucrata HOM05D003391 ORTHO05D005563 7.3e-15 84.7 145 40.0
CAN.G5179.1 Capsicum annuum HOM05D003391 ORTHO05D005563 4.8e-14 82.0 111 45.9
AL1G58840 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 5.3e-13 78.6 66 54.5
Thhalv10012404m.g Eutrema salsugineum HOM05D003391 ORTHO05D005563 6.9e-13 78.2 108 44.4
Sc24g0003350 Simmondsia chinensis HOM05D003391 ORTHO05D005563 1.2e-12 77.4 100 46.0
Actinidia03950 Actinidia chinensis HOM05D003391 ORTHO05D005563 1.5e-12 77.0 149 43.0
AL1G58810 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.3e-11 73.9 66 54.5
SMO196G0220 Selaginella moellendorffii HOM05D003391 ORTHO05D005563 2.9e-11 72.8 175 34.3
Psat1g171000 Pisum sativum HOM05D003391 ORTHO05D005563 4.6e-09 65.5 40 85.0
A02p35070 Brassica napus HOM05D003391 ORTHO05D013251 7.9e-09 64.7 88 45.5
CARHR041020 Cardamine hirsuta HOM05D003391 ORTHO05D013251 7.9e-09 64.7 180 31.1
Mapoly0030s0152 Marchantia polymorpha HOM05D003391 ORTHO05D005563 1.0e-08 64.3 192 30.7
Pp3c8_8190 Physcomitrium patens HOM05D003391 ORTHO05D005563 2.3e-08 63.2 190 29.5
AT1G50970 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 4.3e-07 58.9 174 32.2
Pp3c24_4920 Physcomitrium patens HOM05D003391 ORTHO05D005563 9.6e-07 57.8 176 30.7

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings