Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47652 Striga asiatica HOM05D016832 ORTHO05D000004 1.2e-114 416.4 199 100.0
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 5.9e-32 141.7 114 56.1
SGA_v2.0_scaffold142G35659 Striga asiatica HOM05D016777 ORTHO05D026198 1.0e-20 104.4 94 51.1
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.5e-19 100.5 113 44.2
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 9.8e-19 97.8 112 38.4
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 2.2e-18 96.7 99 42.4
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-17 93.6 112 38.4
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 5.4e-17 92.0 98 41.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 7.8e-16 88.2 115 38.3
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-15 85.9 120 33.3
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-13 80.5 100 40.0
SGA_v2.0_scaffold160G37765 Striga asiatica HOM05D016777 ORTHO05D011213 4.7e-13 79.0 87 48.3
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 4.7e-13 79.0 112 33.9
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-13 78.2 100 37.0
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-12 76.6 93 34.4
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 2.3e-12 76.6 99 40.4
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 3.1e-12 76.3 103 35.9
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 3.4e-11 72.8 93 36.6
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 3.4e-11 72.8 122 30.3
SGA_v2.0_scaffold199G41224 Striga asiatica HOM05D016777 ORTHO05D026198 4.4e-11 72.4 111 35.1
SGA_v2.0_scaffold242G44251 Striga asiatica HOM05D023911 ORTHO05D000004 4.4e-11 72.4 98 39.8
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 5.8e-11 72.0 84 41.7
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 5.8e-11 72.0 118 33.1
QL03p029989 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-10 69.7 119 30.3
SGA_v2.0_scaffold52G18930 Striga asiatica HOM05D035048 ORTHO05D012821 6.4e-10 68.6 98 34.7
SGA_v2.0_scaffold174G39221 Striga asiatica HOM05D000754 ORTHO05D000169 1.1e-09 67.8 80 40.0
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 1.4e-09 67.4 93 34.4
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 1.9e-09 67.0 82 40.2
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.2e-09 66.2 86 37.2
SGA_v2.0_scaffold80G25827 Striga asiatica HOM05D016832 ORTHO05D000044 3.2e-09 66.2 158 28.5
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 9.2e-09 64.7 94 35.1
SGA_v2.0_scaffold154G37091 Striga asiatica HOM05D016832 ORTHO05D000044 9.2e-09 64.7 156 28.8
AUR62038954 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.2e-08 64.3 95 34.7
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-08 63.9 91 36.3
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.6e-08 63.9 80 42.5
SGA_v2.0_scaffold293G47419 Striga asiatica HOM05D055921 ORTHO05D399660 2.0e-08 63.5 93 37.6
PSO210G7233 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-08 63.2 105 31.4
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-08 63.2 92 32.6
RcHm_v2.0_Chr1g0340391 Rosa chinensis HOM05D000003 ORTHO05D000004 3.5e-08 62.8 93 32.3
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 4.6e-08 62.4 101 30.7
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 6.0e-08 62.0 117 35.0
QL05p078226 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-08 62.0 98 28.6
QL05p047317 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-07 61.2 103 33.0
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 1.3e-07 60.8 117 34.2
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.3e-07 60.8 95 34.7
SGA_v2.0_scaffold62G21450 Striga asiatica HOM05D016777 ORTHO05D012297 1.3e-07 60.8 69 39.1
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.3e-07 60.8 95 36.8
Atru.chr13.1500 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 60.5 93 31.2
AUR62039133 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.7e-07 60.5 97 35.1
SGA_v2.0_scaffold140G35467 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-07 60.5 74 41.9
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 2.3e-07 60.1 94 34.0
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-07 59.7 114 34.2
Aa31LG4G9030 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.0e-07 59.7 111 34.2
PSO675G7995 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-07 59.7 81 33.3
CANSAT78G1794 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-07 59.3 93 35.5
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-07 59.3 107 32.7
CANSAT54G1512 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-07 58.9 105 31.4
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 5.0e-07 58.9 94 34.0
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 6.6e-07 58.5 94 36.2
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 6.6e-07 58.5 78 41.0
Atru.chr3.1567 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 58.2 93 31.2
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 58.2 93 31.2
PSO063G2524 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 58.2 103 31.1
PSO063G7344 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 58.2 98 31.6
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 8.6e-07 58.2 101 31.7
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 58.2 95 28.4
Rhsim07G0154700 Rhododendron simsii HOM05D001582 ORTHO05D001598 8.6e-07 58.2 86 34.9
PSO229G0115 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 92 33.7
SGA_v2.0_scaffold28G11732 Striga asiatica HOM05D056663 ORTHO05D011213 1.1e-06 57.8 60 48.3
PSO298G0001 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-06 57.4 101 32.7
RhsimUnG0169300 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-06 57.4 101 26.7
SGA_v2.0_scaffold16G07893 Striga asiatica HOM05D016777 ORTHO05D026198 1.5e-06 57.4 68 39.7
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-06 57.0 93 34.4
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.9e-06 57.0 105 30.5
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.9e-06 57.0 94 35.1
SGA_v2.0_scaffold72G24192 Striga asiatica HOM05D026623 ORTHO05D403235 1.9e-06 57.0 96 31.2
Aqoxy6G01520 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-06 56.6 103 32.0
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 2.5e-06 56.6 120 27.5
FvH4_6g17021 Fragaria vesca HOM05D000003 ORTHO05D000006 2.5e-06 56.6 107 32.7
PSO675G1122 Papaver somniferum HOM05D000003 ORTHO05D001026 2.5e-06 56.6 103 31.1
CANSAT36G0004 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 56.2 113 34.5
CANSAT80G0272 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 56.2 115 31.3
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 3.3e-06 56.2 93 30.1
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 3.3e-06 56.2 94 33.0
PSO761G0383 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-06 56.2 121 25.6
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 56.2 105 28.6
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-06 56.2 105 28.6
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 3.3e-06 56.2 115 27.0
Aqoxy2G01350 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-06 55.8 110 32.7
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 4.3e-06 55.8 103 33.0
FvH4_5g08581 Fragaria vesca HOM05D000003 ORTHO05D000004 4.3e-06 55.8 112 27.7
Manes.18G060301 Manihot esculenta HOM05D000003 ORTHO05D000004 4.3e-06 55.8 94 26.6
PSO210G1365 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-06 55.8 81 32.1
PSO339G2402 Papaver somniferum HOM05D007919 ORTHO05D006738 4.3e-06 55.8 98 27.6
QL01p018735 Quercus lobata HOM05D000003 ORTHO05D000004 4.3e-06 55.8 97 32.0
SGA_v2.0_scaffold225G43070 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-06 55.8 96 29.2
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 4.3e-06 55.8 59 42.4
Atru.chr12.386 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 55.5 93 29.0
CANSAT01G3187 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.5 108 33.3
CANSAT64G0596 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-06 55.5 95 32.6
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 5.6e-06 55.5 106 31.1
Aqoxy1G01582 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.3e-06 55.1 104 31.7
QL03p040865 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-06 55.1 103 31.1
SGA_v2.0_scaffold69G23308 Striga asiatica HOM05D055921 ORTHO05D405060 7.3e-06 55.1 84 32.1
Atru.chr6.65 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 54.7 113 31.0
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-06 54.7 103 29.1
PSO063G0448 Papaver somniferum HOM05D000003 ORTHO05D000006 9.5e-06 54.7 101 30.7
PSO832G2095 Papaver somniferum HOM05D007919 ORTHO05D006738 9.5e-06 54.7 101 31.7
QL05p014002 Quercus lobata HOM05D000003 ORTHO05D000004 9.5e-06 54.7 102 26.5
Rhsim04G0060300 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.5e-06 54.7 84 32.1
Rhsim04G0211900 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.5e-06 54.7 103 27.2


User provided reference genes

Program Settings