Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 3.6e-82 308.1 151 100.0
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 8.2e-34 147.5 98 74.5
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 2.4e-33 146.0 95 76.8
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 5.3e-33 144.8 96 75.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.0e-32 142.9 94 76.6
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 5.9e-32 141.4 93 75.3
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.0e-31 140.6 93 74.2
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.0e-31 140.6 93 73.1
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.2e-31 139.4 93 72.0
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 3.8e-31 138.7 94 73.4
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 3.8e-31 138.7 93 74.2
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 3.8e-31 138.7 95 74.7
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 5.0e-31 138.3 98 74.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 6.5e-31 137.9 93 72.0
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.1e-30 137.1 96 75.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.1e-30 137.1 93 71.0
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.1e-30 137.1 93 71.0
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.9e-30 136.3 106 65.1
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 2.5e-30 136.0 93 72.0
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 2.5e-30 136.0 93 77.4
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 3.2e-30 135.6 99 72.7
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.2e-30 135.2 98 70.4
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.2e-30 135.2 92 76.1
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.2e-30 134.4 93 76.3
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.2e-30 134.4 93 76.3
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 7.2e-30 134.4 93 76.3
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 7.2e-30 134.4 95 73.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 9.4e-30 134.0 94 70.2
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 9.4e-30 134.0 95 74.7
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.6e-29 133.3 94 69.1
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.6e-29 133.3 93 75.3
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.1e-29 132.9 94 73.4
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 6.1e-29 131.3 93 73.1
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 7.9e-29 131.0 95 69.5
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.0e-28 130.6 95 71.6
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.0e-28 130.6 93 72.0
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.0e-28 130.6 96 70.8
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.4e-28 130.2 94 72.3
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.8e-28 129.8 93 72.0
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 3.0e-28 129.0 93 71.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 3.9e-28 128.6 93 73.1
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 3.9e-28 128.6 97 68.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 6.7e-28 127.9 102 63.7
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 6.7e-28 127.9 95 69.5
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.6e-27 125.9 98 65.3
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 5.7e-27 124.8 98 67.3
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 5.7e-27 124.8 98 66.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 7.4e-27 124.4 94 70.2
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 9.7e-27 124.0 95 70.5
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 9.7e-27 124.0 98 67.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.7e-26 123.2 98 64.3
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.7e-26 123.2 84 72.6
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.7e-26 123.2 99 66.7
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.2e-26 122.9 95 69.5
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.8e-26 122.5 94 64.9
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.8e-26 122.5 98 65.3
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 2.8e-26 122.5 98 65.3
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.7e-26 122.1 95 69.5
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 3.7e-26 122.1 99 66.7
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 4.8e-26 121.7 98 66.3
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 6.3e-26 121.3 94 68.1
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 6.3e-26 121.3 99 65.7
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 8.2e-26 120.9 99 64.6
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 8.2e-26 120.9 99 64.6
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 8.2e-26 120.9 84 70.2
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 8.2e-26 120.9 94 67.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.1e-25 120.6 98 65.3
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-25 120.2 104 61.5
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.4e-25 120.2 94 67.0
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.4e-25 120.2 100 65.0
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.8e-25 119.8 94 68.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 1.8e-25 119.8 96 67.7
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 3.1e-25 119.0 98 61.2
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 4.1e-25 118.6 99 63.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 4.1e-25 118.6 97 64.9
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 6.9e-25 117.9 93 67.7
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 2.0e-24 116.3 95 67.4
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 7.7e-24 114.4 94 66.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 7.7e-24 114.4 100 60.0
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-23 113.2 98 59.2
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.2e-23 112.8 99 61.6
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 6.5e-23 111.3 95 65.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-22 110.5 98 58.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 9.4e-22 107.5 94 63.8
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.2e-21 107.1 98 61.2
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.2e-21 107.1 98 61.2
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 1.2e-21 107.1 98 61.2
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.2e-21 107.1 98 61.2
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 3.6e-21 105.5 102 56.9
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.0e-20 104.0 98 60.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.3e-18 97.1 99 53.5
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.5e-16 89.0 89 56.2
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 5.9e-16 88.2 76 60.5
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 8.5e-15 84.3 82 61.0
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-13 79.7 89 49.4
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 6.1e-13 78.2 63 63.5
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.0e-12 77.4 79 55.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-12 76.3 100 49.0
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 8.8e-12 74.3 75 54.7
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 8.5e-07 57.8 59 55.9
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.2e-06 55.5 104 34.6


User provided reference genes

Program Settings