Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 2.6e-114 415.2 186 100.0
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 1.4e-64 250.0 125 85.6
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-38 163.3 125 55.2
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 5.3e-35 151.8 125 49.6
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.2e-26 124.0 266 27.4
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.6e-26 123.6 114 44.7
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 2.9e-25 119.4 115 44.3
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 8.6e-25 117.9 184 32.6
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 3.6e-23 112.5 78 56.4
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-23 111.3 180 31.7
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-22 110.2 252 24.2
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 8.9e-22 107.8 112 39.3
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 4.4e-21 105.5 91 49.5
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 4.9e-20 102.1 160 33.8
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 8.3e-20 101.3 117 41.9
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 2.4e-19 99.8 181 33.7
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 3.5e-18 95.9 162 27.8
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 3.5e-18 95.9 85 43.5
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 5.9e-18 95.1 109 34.9
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 7.8e-18 94.7 103 35.9
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 2.3e-17 93.2 100 40.0
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 1.2e-15 87.4 106 34.9
SGA_v2.0_scaffold170G38754 Striga asiatica HOM05D010565 ORTHO05D011213 3.6e-15 85.9 90 41.1
SGA_v2.0_scaffold19G08782 Striga asiatica HOM05D010565 ORTHO05D011213 3.6e-15 85.9 90 41.1
SGA_v2.0_scaffold1G00691 Striga asiatica HOM05D010565 ORTHO05D011213 3.6e-15 85.9 90 41.1
SGA_v2.0_scaffold202G41432 Striga asiatica HOM05D010565 ORTHO05D011213 8.0e-15 84.7 90 40.0
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 1.0e-14 84.3 162 28.4
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 1.0e-14 84.3 104 40.4
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-14 84.0 192 28.1
SGA_v2.0_scaffold140G35467 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-14 83.6 75 54.7
Aa31sc74G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-14 82.4 212 25.9
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-13 79.0 108 33.3
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 7.5e-13 78.2 81 40.7
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 9.8e-13 77.8 84 40.5
SGA_v2.0_scaffold121G33090 Striga asiatica HOM05D002093 ORTHO05D008902 1.1e-11 74.3 62 46.8
SGA_v2.0_scaffold22G09837 Striga asiatica HOM05D010565 ORTHO05D011213 1.4e-11 73.9 87 29.9
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 3.2e-11 72.8 129 33.3
BraA02t07551Z Brassica rapa HOM05D000003 ORTHO05D000004 4.1e-11 72.4 113 30.1
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 5.4e-11 72.0 186 29.6
BolC3t16774H Brassica oleracea HOM05D000003 ORTHO05D001498 5.4e-11 72.0 127 33.9
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-10 70.9 183 27.3
PSO675G0496 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-10 70.5 160 28.1
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 1.6e-10 70.5 106 28.3
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.0e-10 70.1 155 25.2
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-10 69.7 170 28.2
BolC6t37438H Brassica oleracea HOM05D000003 ORTHO05D001498 2.7e-10 69.7 159 28.3
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 4.6e-10 68.9 165 24.2
SGA_v2.0_scaffold257G45726 Striga asiatica HOM05D010565 ORTHO05D011213 6.0e-10 68.6 76 36.8
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 1.3e-09 67.4 69 42.0
COL.COLO4_10073 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.7e-09 67.0 103 30.1
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.7e-09 67.0 113 28.3
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-09 66.2 178 28.1
BcaB05g21914 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-09 66.2 115 31.3
SGA_v2.0_scaffold131G34377 Striga asiatica HOM05D023911 ORTHO05D011213 3.0e-09 66.2 78 38.5
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 3.0e-09 66.2 73 39.7
BraA04t16656Z Brassica rapa HOM05D000003 ORTHO05D001498 3.9e-09 65.9 120 32.5
Aa31LG10G11530 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-09 65.5 141 29.1
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 5.0e-09 65.5 187 22.5
BcaB05g23696 Brassica carinata HOM05D000003 ORTHO05D001498 6.6e-09 65.1 115 31.3
BolC2t11594H Brassica oleracea HOM05D000003 ORTHO05D001498 6.6e-09 65.1 120 29.2
BcaC02g10637 Brassica carinata HOM05D000003 ORTHO05D001498 8.6e-09 64.7 142 28.9
Aa31sc85G50 Aethionema arabicum HOM05D000003 ORTHO05D001091 1.1e-08 64.3 111 32.4
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 64.3 160 26.9
BcaB06g26924 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-08 63.9 114 32.5
Rhsim11G0140100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-08 63.9 95 29.5
BcaC04g21635 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-08 63.5 116 31.9
C09p39900 Brassica napus HOM05D000003 ORTHO05D000004 1.9e-08 63.5 101 33.7
BraA09t39092Z Brassica rapa HOM05D000003 ORTHO05D001498 1.9e-08 63.5 111 29.7
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-08 63.5 107 29.9
Aa31LG2G18910 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-08 63.2 133 29.3
Aa31LG8G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-08 63.2 112 31.2
EL10Ac4g08380 Beta vulgaris HOM05D000003 ORTHO05D000004 2.5e-08 63.2 175 21.7
C02p57240 Brassica napus HOM05D000003 ORTHO05D004851 2.5e-08 63.2 95 34.7
BolC3t21459H Brassica oleracea HOM05D000003 ORTHO05D000004 2.5e-08 63.2 105 32.4
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 2.5e-08 63.2 120 30.0
SGA_v2.0_scaffold260G45885 Striga asiatica HOM05D003104 ORTHO05D003448 2.5e-08 63.2 52 50.0
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 3.3e-08 62.8 123 29.3
SGA_v2.0_scaffold78G25376 Striga asiatica HOM05D010565 ORTHO05D405841 3.3e-08 62.8 61 44.3
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-08 62.4 129 28.7
Aa31LG2G19820 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-08 62.4 149 26.8
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 4.3e-08 62.4 180 25.0
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 4.3e-08 62.4 59 44.1
CANSAT56G1334 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-08 62.0 124 29.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 5.6e-08 62.0 72 36.1
BolC3t15869H Brassica oleracea HOM05D000003 ORTHO05D000004 7.3e-08 61.6 97 35.1
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 7.3e-08 61.6 180 25.0
Aa31LG7G10790 Aethionema arabicum HOM05D000003 ORTHO05D001091 9.5e-08 61.2 126 31.0
BraA04t16438Z Brassica rapa HOM05D000003 ORTHO05D001498 9.5e-08 61.2 125 28.8
AUR62038281 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-08 61.2 185 22.7
PSO170G3478 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-08 61.2 176 24.4
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 9.5e-08 61.2 88 27.3
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 1.2e-07 60.8 118 30.5
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 1.2e-07 60.8 56 44.6
SGA_v2.0_scaffold403G51004 Striga asiatica HOM05D011754 ORTHO05D014689 1.2e-07 60.8 88 34.1
SGA_v2.0_scaffold424G51472 Striga asiatica HOM05D000003 ORTHO05D011213 1.2e-07 60.8 99 34.3
SGA_v2.0_scaffold43G16267 Striga asiatica HOM05D001376 ORTHO05D003384 1.2e-07 60.8 77 29.9
AUR62041301 Chenopodium quinoa HOM05D009702 ORTHO05D000004 1.6e-07 60.5 97 27.8
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-07 59.7 127 29.9
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 2.8e-07 59.7 173 26.6
BcaB06g26350 Brassica carinata HOM05D001350 ORTHO05D001091 2.8e-07 59.7 130 31.5
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 2.8e-07 59.7 180 25.0
CANSAT35G1320 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 68 38.2
AUR62030068 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 148 25.0
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 2.8e-07 59.7 76 35.5
Aa31LG3G12250 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.6e-07 59.3 181 26.0
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.6e-07 59.3 117 28.2
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 3.6e-07 59.3 105 29.5
BcaNung01203 Brassica carinata HOM05D000003 ORTHO05D000004 3.6e-07 59.3 99 36.4
BcaC03g18169 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-07 58.9 118 31.4
Aa31sc146G90 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.2e-07 58.5 199 23.6
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 6.2e-07 58.5 109 33.9
BolC7t42817H Brassica oleracea HOM05D000003 ORTHO05D000004 6.2e-07 58.5 126 31.0
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.0e-07 58.2 150 28.7
SGA_v2.0_scaffold355G49769 Striga asiatica HOM05D000003 ORTHO05D011213 8.0e-07 58.2 63 33.3
Aa31LG7G12310 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 168 25.6
BcaC09g50917 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-06 57.8 111 28.8
BolC6t35388H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-06 57.8 117 31.6
CANSAT54G1958 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-06 57.8 90 32.2
SGA_v2.0_scaffold117G32378 Striga asiatica HOM05D009140 ORTHO05D011213 1.1e-06 57.8 54 40.7
BcaC08g43524 Brassica carinata HOM05D000003 ORTHO05D000004 1.4e-06 57.4 149 30.2
BraA04t16803Z Brassica rapa HOM05D000003 ORTHO05D001498 1.4e-06 57.4 119 30.3
CANSAT78G2330 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 73 35.6
CARHR166210 Cardamine hirsuta HOM05D000003 ORTHO05D001498 1.4e-06 57.4 185 27.0
CiPaw.07G081000 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-06 57.4 146 24.7
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.4e-06 57.4 40 55.0
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-06 57.0 99 29.3
EL10Ac8g19094 Beta vulgaris HOM05D000003 ORTHO05D000004 1.8e-06 57.0 128 26.6
BcaB01g00479 Brassica carinata HOM05D000003 ORTHO05D004851 1.8e-06 57.0 120 30.0
AUR62018115 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.8e-06 57.0 97 30.9
Rhsim09G0012500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-06 57.0 98 27.6
SGA_v2.0_scaffold120G33020 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-06 57.0 61 42.6
Aa31LG10G9450 Aethionema arabicum HOM05D000003 ORTHO05D001091 2.3e-06 56.6 117 32.5
EL10Ac2g04745 Beta vulgaris HOM05D000003 ORTHO05D000006 2.3e-06 56.6 144 20.8
EL10Ac5g11069 Beta vulgaris HOM05D000003 ORTHO05D000004 2.3e-06 56.6 178 24.2
BraA09t41396Z Brassica rapa HOM05D001239 ORTHO05D000925 2.3e-06 56.6 116 30.2
CANSAT01G1668 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-06 56.6 73 32.9
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.3e-06 56.6 91 26.4
Sp6g38460 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.3e-06 56.6 122 29.5
BcaB06g25892 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-06 56.2 103 29.1
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.1e-06 56.2 116 30.2
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 3.1e-06 56.2 100 32.0
Aa31LG3G12630 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.8 124 32.3
Aa31LG9G5080 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.8 117 28.2
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.8 110 29.1
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 4.0e-06 55.8 120 29.2
BcaC04g21940 Brassica carinata HOM05D000003 ORTHO05D000004 4.0e-06 55.8 170 28.2
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 4.0e-06 55.8 111 28.8
BolC7t41032H Brassica oleracea HOM05D000003 ORTHO05D000004 4.0e-06 55.8 108 30.6
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.0e-06 55.8 153 20.3
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 4.0e-06 55.8 168 22.0
Aa31LG10G16810 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-06 55.5 210 22.4
Aa31LG1G13000 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.2e-06 55.5 124 29.0
BcaB01g06093 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-06 55.5 119 25.2
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-06 55.5 114 28.1
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 5.2e-06 55.5 105 30.5
Nn6g35689 Nelumbo nucifera HOM05D000003 ORTHO05D000004 5.2e-06 55.5 130 28.5
Aa31LG8G11140 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.8e-06 55.1 96 36.5
Aa31LG8G12050 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.8e-06 55.1 134 30.6
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-06 55.1 97 32.0
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 6.8e-06 55.1 157 26.1
BcaC01g01442 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-06 55.1 98 26.5
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-06 55.1 97 32.0
BcaC08g43351 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-06 55.1 97 32.0
CANSAT54G2428 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-06 55.1 115 30.4
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-06 55.1 52 36.5
CANSAT80G2177 Cannabis sativa HOM05D000003 ORTHO05D009135 6.8e-06 55.1 66 36.4
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.8e-06 55.1 112 29.5
AUR62005341 Chenopodium quinoa HOM05D000003 ORTHO05D000004 6.8e-06 55.1 119 26.9
Lj2g0015378 Lotus japonicus HOM05D000003 ORTHO05D000925 6.8e-06 55.1 117 29.1
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-06 55.1 106 30.2
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.9e-06 54.7 126 29.4
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 8.9e-06 54.7 141 27.0
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 8.9e-06 54.7 109 29.4
BcaB08g35769 Brassica carinata HOM05D000003 ORTHO05D001498 8.9e-06 54.7 117 30.8
CANSAT51G0009 Cannabis sativa HOM05D000003 ORTHO05D000004 8.9e-06 54.7 49 40.8
CANSAT80G2229 Cannabis sativa HOM05D000003 ORTHO05D000004 8.9e-06 54.7 220 23.2
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 8.9e-06 54.7 60 36.7


User provided reference genes

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