Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 8.9e-116 420.2 205 100.0
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-15 85.5 105 35.2
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 6.8e-15 85.1 99 36.4
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-15 84.7 105 36.2
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 1.5e-14 84.0 100 38.0
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 1.5e-14 84.0 100 38.0
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-14 81.3 118 33.1
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 9.8e-14 81.3 124 33.1
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 9.8e-14 81.3 124 33.1
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.7e-13 80.5 98 39.8
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 2.2e-13 80.1 95 38.9
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-13 80.1 98 39.8
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-13 79.7 95 38.9
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-13 79.7 95 38.9
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-13 79.7 95 38.9
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 2.8e-13 79.7 95 38.9
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-13 79.7 104 36.5
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-13 79.3 118 32.2
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 3.7e-13 79.3 113 37.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-13 79.0 191 26.2
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 6.3e-13 78.6 100 38.0
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-13 78.2 95 37.9
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-13 78.2 95 37.9
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-13 78.2 95 37.9
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-13 78.2 95 37.9
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 8.3e-13 78.2 95 38.9
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 8.3e-13 78.2 100 37.0
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-12 77.8 105 33.3
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-12 77.8 91 39.6
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 1.4e-12 77.4 111 35.1
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-12 77.0 163 22.1
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-12 76.6 118 31.4
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 2.4e-12 76.6 95 38.9
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 2.4e-12 76.6 95 38.9
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 3.1e-12 76.3 150 28.7
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 4.1e-12 75.9 120 33.3
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 4.1e-12 75.9 95 38.9
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 4.1e-12 75.9 95 38.9
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 4.1e-12 75.9 126 31.0
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 5.4e-12 75.5 99 35.4
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 5.4e-12 75.5 85 38.8
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 7.0e-12 75.1 111 35.1
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-12 74.7 118 31.4
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-12 74.7 104 34.6
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-12 74.7 104 32.7
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-11 73.9 104 33.7
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-11 73.9 104 34.6
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-11 73.6 116 37.1
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-11 73.2 104 33.7
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 2.7e-11 73.2 95 38.9
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 73.2 116 37.1
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 2.7e-11 73.2 116 37.1
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 2.7e-11 73.2 116 37.1
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 73.2 116 37.1
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 73.2 116 37.1
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 73.2 116 37.1
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-11 72.8 117 39.3
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 3.5e-11 72.8 103 31.1
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-11 72.4 103 35.0
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-11 72.4 104 34.6
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 4.5e-11 72.4 95 36.8
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 5.9e-11 72.0 95 37.9
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-11 72.0 116 37.1
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-11 72.0 116 36.2
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.8e-11 71.6 104 31.7
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.8e-11 71.6 110 31.8
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 70.9 104 33.7
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.9 118 31.4
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.9 104 34.6
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 2.3e-10 70.1 116 36.2
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-10 69.7 104 33.7
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-10 69.3 104 33.7
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-10 68.9 92 37.0
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-10 68.9 92 37.0
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-10 68.9 92 37.0
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-10 68.9 92 37.0
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-10 68.9 92 37.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-10 68.9 104 31.7
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 8.6e-10 68.2 87 39.1
SGA_v2.0_scaffold308G48118 Striga asiatica HOM05D012404 ORTHO05D002765 8.6e-10 68.2 85 37.6
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-09 67.8 107 30.8
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-09 67.8 107 31.8
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-09 67.0 104 29.8
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-09 66.6 104 32.7
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-09 66.6 104 31.7
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 2.5e-09 66.6 105 33.3
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 3.3e-09 66.2 104 33.7
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.3e-09 65.9 104 30.8
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-09 65.9 94 31.9
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-09 65.5 104 31.7
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-09 65.5 105 33.3
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 7.3e-09 65.1 91 41.8
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.5e-09 64.7 94 30.9
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-08 63.9 167 28.1
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 1.6e-08 63.9 167 28.1
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-08 63.9 167 28.1
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-08 63.5 99 34.3
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 2.1e-08 63.5 92 31.5
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 2.8e-08 63.2 99 25.3
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-08 62.8 86 33.7
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-08 62.0 83 33.7
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-08 62.0 113 28.3
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 6.1e-08 62.0 99 25.3
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 6.1e-08 62.0 102 29.4
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-07 61.2 104 32.7
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.0e-07 61.2 100 30.0
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-07 61.2 93 32.3
SGA_v2.0_scaffold16G07749 Striga asiatica HOM05D015252 ORTHO05D002765 1.8e-07 60.5 106 33.0
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-07 60.1 80 33.8
Oeu041030.1 Olea europaea HOM05D012404 ORTHO05D002765 3.0e-07 59.7 68 41.2
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-07 59.3 90 33.3
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-07 59.3 90 33.3
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.2e-07 58.9 94 33.0
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-07 58.5 97 29.9
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.8e-07 58.5 80 33.8
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-06 57.8 71 36.6
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.6e-06 56.6 100 28.0
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 55.5 53 52.8
CANSAT35G0433 Cannabis sativa HOM05D012404 ORTHO05D002765 9.8e-06 54.7 98 28.6
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.8e-06 54.7 95 28.4
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.8e-06 54.7 136 26.5


User provided reference genes

Program Settings