Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.3e-48 196.1 101 100.0
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 7.9e-25 117.1 94 69.1
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 3.9e-24 114.8 99 64.6
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 6.7e-24 114.0 108 64.8
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 3.3e-23 111.7 106 62.3
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 7.4e-23 110.5 101 58.4
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.3e-22 109.8 92 65.2
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 2.2e-22 109.0 89 65.2
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 3.7e-22 108.2 89 65.2
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 8.2e-22 107.1 107 57.9
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 1.1e-21 106.7 94 62.8
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 1.5e-20 102.8 100 59.0
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 3.4e-20 101.7 91 59.3
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 3.4e-20 101.7 99 54.5
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 4.5e-20 101.3 96 58.3
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 7.7e-20 100.5 86 61.6
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.0e-19 100.1 90 57.8
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.3e-19 99.8 92 62.0
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.3e-19 99.8 92 62.0
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.7e-19 99.4 95 60.0
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.7e-19 99.4 95 60.0
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.2e-19 99.0 90 60.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.2e-19 99.0 91 60.4
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.9e-19 98.6 95 60.0
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.8e-19 98.2 92 60.9
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.8e-19 98.2 92 60.9
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.1e-18 96.7 89 59.6
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.2e-18 94.7 90 56.7
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 5.5e-18 94.4 91 57.1
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.5e-18 94.4 91 59.3
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 7.2e-18 94.0 92 60.9
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 7.2e-18 94.0 88 60.2
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 9.4e-18 93.6 89 59.6
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 9.4e-18 93.6 89 59.6
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 9.4e-18 93.6 92 60.9
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.6e-17 92.8 89 59.6
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.6e-17 92.8 89 55.1
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 2.1e-17 92.4 92 56.5
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 3.6e-17 91.7 96 56.2
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 3.6e-17 91.7 89 51.7
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.8e-16 89.4 90 53.3
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 1.8e-16 89.4 89 51.7
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.8e-16 89.4 95 52.6
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.8e-16 89.4 96 55.2
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.3e-16 89.0 95 54.7
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 3.0e-16 88.6 89 51.7
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 3.0e-16 88.6 89 57.3
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 3.9e-16 88.2 92 57.6
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 6.7e-16 87.4 95 52.6
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 8.8e-16 87.0 89 52.8
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.0e-15 85.9 90 50.0
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.0e-15 85.9 90 50.0
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 2.6e-15 85.5 91 56.0
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 2.6e-15 85.5 90 50.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 2.6e-15 85.5 90 57.8
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.3e-14 83.2 90 48.9
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 2.2e-14 82.4 98 51.0
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 4.8e-14 81.3 96 52.1
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 4.8e-14 81.3 66 66.7
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 4.1e-13 78.2 89 46.1
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 9.1e-13 77.0 89 52.8
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.2e-12 76.6 62 67.7
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 5.9e-12 74.3 62 66.1
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 5.9e-12 74.3 91 48.4
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.3e-11 73.2 73 60.3
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 2.2e-11 72.4 91 47.3
Migut.H02288 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.2e-11 72.4 81 51.9
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 3.8e-11 71.6 85 50.6
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 3.8e-11 71.6 91 49.5
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 5.0e-11 71.2 59 66.1
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 1.5e-10 69.7 100 46.0
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.5e-10 69.7 98 44.9
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 4.2e-10 68.2 86 47.7
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.1e-09 65.9 102 47.1
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 2.3e-08 62.4 80 47.5
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 2.8e-06 55.5 51 60.8


User provided reference genes

Program Settings