Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold169G38698 Striga asiatica HOM05D000181 ORTHO05D038347 3.4e-62 241.5 123 100.0
Gohir.A13G187200 Gossypium hirsutum HOM05D000181 ORTHO05D004115 6.7e-10 67.8 39 87.2
Hma1.2p1_0544F.1_g175750 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 6.7e-10 67.8 39 87.2
Lj7A267T34 Lonicera japonica HOM05D000181 ORTHO05D004115 6.7e-10 67.8 39 84.6
vmacro14256 Vaccinium macrocarpon HOM05D000181 ORTHO05D004115 6.7e-10 67.8 39 87.2
CSS0002059 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 1.1e-09 67.0 44 79.5
Cpa.g.sc7.184 Carica papaya HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 84.6
Dinv22890 Davidia involucrata HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 84.6
Eucgr.C00660 Eucalyptus grandis HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 87.2
HanXRQChr03g0079601 Helianthus annuus HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 87.2
SGA_v2.0_scaffold163G38025 Striga asiatica HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 87.2
GSVIVG01035393001 Vitis vinifera HOM05D000181 ORTHO05D004115 1.1e-09 67.0 39 87.2
Actinidia18180 Actinidia chinensis HOM05D000181 ORTHO05D004115 1.5e-09 66.6 39 84.6
BcaC07g40834 Brassica carinata HOM05D000181 ORTHO05D004115 2.0e-09 66.2 80 50.0
C08p38290 Brassica napus HOM05D000181 ORTHO05D004115 2.0e-09 66.2 80 50.0
PGR031G3719 Punica granatum HOM05D000181 ORTHO05D004115 2.0e-09 66.2 38 86.8
Aqoxy7G01194 Aquilegia oxysepala HOM05D000181 ORTHO05D004115 2.6e-09 65.9 39 87.2
MSTRG.14059 Avicennia marina HOM05D000181 ORTHO05D004115 2.6e-09 65.9 39 84.6
A09p55370 Brassica napus HOM05D000181 ORTHO05D004115 2.6e-09 65.9 81 49.4
BraA09t40939Z Brassica rapa HOM05D000181 ORTHO05D004115 2.6e-09 65.9 82 48.8
CiPaw.15G037900 Carya illinoinensis HOM05D000181 ORTHO05D004115 2.6e-09 65.9 39 84.6
Migut.E01569 Erythranthe guttata HOM05D000181 ORTHO05D004115 2.6e-09 65.9 39 84.6
CSS0016987 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 3.3e-09 65.5 44 77.3
Lj8A537T23 Lonicera japonica HOM05D000181 ORTHO05D004115 3.3e-09 65.5 39 82.1
MBI01_g20326_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D004115 3.3e-09 65.5 39 84.6
MSTRG.11656 Avicennia marina HOM05D000181 ORTHO05D004115 4.4e-09 65.1 39 84.6
HanXRQChr07g0190461 Helianthus annuus HOM05D000181 ORTHO05D004115 4.4e-09 65.1 88 45.5
Actinidia30320 Actinidia chinensis HOM05D000181 ORTHO05D004115 5.7e-09 64.7 39 84.6
arahy.Tifrunner.gnm1.ann1.47L445 Arachis hypogaea HOM05D000181 ORTHO05D004115 5.7e-09 64.7 39 79.5
arahy.Tifrunner.gnm1.ann1.V8EHWM Arachis hypogaea HOM05D000181 ORTHO05D004115 5.7e-09 64.7 39 79.5
Cfa017965 Carpinus fangiana HOM05D000181 ORTHO05D004115 5.7e-09 64.7 39 84.6
Prupe.1G410800 Prunus persica HOM05D000181 ORTHO05D004115 5.7e-09 64.7 60 60.0
unitig_46.g17912 Utricularia gibba HOM05D000181 ORTHO05D004115 5.7e-09 64.7 39 82.1
COL.COLO4_21069 Corchorus olitorius HOM05D000181 ORTHO05D004115 7.4e-09 64.3 39 84.6
Gorai.013G220100 Gossypium raimondii HOM05D000181 ORTHO05D004115 7.4e-09 64.3 39 84.6
Hma1.2p1_0055F.1_g031460 Hydrangea macrophylla HOM05D000181 ORTHO05D004115 7.4e-09 64.3 39 82.1
Lsat_1_v5_gn_6_13540 Lactuca sativa HOM05D000181 ORTHO05D004115 7.4e-09 64.3 38 86.8
MBI04_g31158_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D004115 7.4e-09 64.3 39 82.1
MD15G1058100 Malus domestica HOM05D000181 ORTHO05D004115 7.4e-09 64.3 60 60.0
Sabra06G0176200 Salix brachista HOM05D000181 ORTHO05D004115 7.4e-09 64.3 61 57.4
BcaB08g35333 Brassica carinata HOM05D000181 ORTHO05D004115 9.7e-09 63.9 79 49.4
BcaC02g08307 Brassica carinata HOM05D000181 ORTHO05D004115 9.7e-09 63.9 81 49.4
C04p55950 Brassica napus HOM05D000181 ORTHO05D004115 9.7e-09 63.9 81 49.4
BolC4t27128H Brassica oleracea HOM05D000181 ORTHO05D004115 9.7e-09 63.9 81 49.4
CAN.G9.21 Capsicum annuum HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 79.5
Nitab4.5_0002829g0060 Nicotiana tabacum HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 79.5
Nitab4.5_0005436g0050 Nicotiana tabacum HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 79.5
PSO210G3118 Papaver somniferum HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 82.1
Solyc08g063050.3 Solanum lycopersicum HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 79.5
Sopen08g018620 Solanum pennellii HOM05D000181 ORTHO05D004115 9.7e-09 63.9 39 79.5
ATR0026G047 Amborella trichopoda HOM05D000181 ORTHO05D038347 1.3e-08 63.5 39 79.5
BcaB06g29602 Brassica carinata HOM05D000181 ORTHO05D004115 1.3e-08 63.5 81 48.1
Haze_18171 Corylus avellana HOM05D000181 ORTHO05D004115 1.3e-08 63.5 39 82.1
Gohir.D07G021500 Gossypium hirsutum HOM05D000181 ORTHO05D004115 1.3e-08 63.5 39 82.1
Gorai.001G022200 Gossypium raimondii HOM05D000181 ORTHO05D004115 1.3e-08 63.5 39 82.1
QL02p001047 Quercus lobata HOM05D000181 ORTHO05D004115 1.3e-08 63.5 44 75.0
Sed0014575 Sechium edule HOM05D000181 ORTHO05D004115 1.3e-08 63.5 39 79.5
TWI34G1632 Tripterygium wilfordii HOM05D000181 ORTHO05D004115 1.3e-08 63.5 39 79.5
TAR636G0478 Trochodendron aralioides HOM05D000181 ORTHO05D004115 1.3e-08 63.5 44 75.0
A04p20240 Brassica napus HOM05D000181 ORTHO05D004115 1.7e-08 63.2 81 48.1
BraA04t17603Z Brassica rapa HOM05D000181 ORTHO05D004115 1.7e-08 63.2 81 48.1
CARHR114870 Cardamine hirsuta HOM05D000181 ORTHO05D004115 1.7e-08 63.2 81 48.1
CiPaw.16G028100 Carya illinoinensis HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 79.5
Ciclev10007603m.g Citrus clementina HOM05D000181 ORTHO05D004115 1.7e-08 63.2 63 58.7
Duzib150G1411 Durio zibethinus HOM05D000181 ORTHO05D004115 1.7e-08 63.2 60 61.7
Duzib168G0634 Durio zibethinus HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 82.1
Thhalv10001918m.g Eutrema salsugineum HOM05D000181 ORTHO05D004115 1.7e-08 63.2 81 49.4
Gohir.D13G194000 Gossypium hirsutum HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 82.1
Nn8g38828 Nelumbo nucifera HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 82.1
Sc09g0009870 Simmondsia chinensis HOM05D000181 ORTHO05D004115 1.7e-08 63.2 38 81.6
Thecc.09G055200 Theobroma cacao HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 82.1
HPP92_007658 Vanilla planifolia HOM05D000181 ORTHO05D004115 1.7e-08 63.2 39 82.1
CSS0033670 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D004115 2.2e-08 62.8 39 82.1
PSO210G5134 Papaver somniferum HOM05D000181 ORTHO05D004115 2.2e-08 62.8 39 79.5
TAR624G0593 Trochodendron aralioides HOM05D000181 ORTHO05D004115 2.2e-08 62.8 44 77.3
DCAR_003130 Daucus carota HOM05D000181 ORTHO05D004115 2.8e-08 62.4 39 82.1
Gohir.A07G021700 Gossypium hirsutum HOM05D000181 ORTHO05D004115 2.8e-08 62.4 39 79.5
Lalb_Chr24g0399691 Lupinus albus HOM05D000181 ORTHO05D004115 2.8e-08 62.4 39 79.5
MD08G1063300 Malus domestica HOM05D000181 ORTHO05D004115 2.8e-08 62.4 38 81.6
Os01g0574500 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D004115 2.8e-08 62.4 67 50.7
THA.LOC104818572 Tarenaya hassleriana HOM05D000181 ORTHO05D004115 2.8e-08 62.4 46 67.4
Zm00001eb160160 Zea mays HOM05D000181 ORTHO05D004115 2.8e-08 62.4 39 76.9
Glyma.14G096000 Glycine max HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 76.9
Manes.03G049000 Manihot esculenta HOM05D000181 ORTHO05D004115 3.7e-08 62.0 38 81.6
Manes.16G081300 Manihot esculenta HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 76.9
Phvul.001G036400 Phaseolus vulgaris HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 76.9
RcHm_v2.0_Chr6g0311091 Rosa chinensis HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 82.1
THA.LOC104803725 Tarenaya hassleriana HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 74.4
TWI63G0691 Tripterygium wilfordii HOM05D000181 ORTHO05D004115 3.7e-08 62.0 60 60.0
VMungo0647G1346 Vigna mungo HOM05D000181 ORTHO05D004115 3.7e-08 62.0 39 76.9
Actinidia01221 Actinidia chinensis HOM05D000179 ORTHO05D055366 4.8e-08 61.6 39 82.1
Aa31LG5G9640 Aethionema arabicum HOM05D000181 ORTHO05D004115 4.8e-08 61.6 39 74.4
MELO3C016875.2 Cucumis melo HOM05D000181 ORTHO05D004115 4.8e-08 61.6 85 44.7
CsaV3_4G035670 Cucumis sativus L. HOM05D000181 ORTHO05D004115 4.8e-08 61.6 85 44.7
Peaxi162Scf00327g00614 Petunia axillaris HOM05D000181 ORTHO05D004115 4.8e-08 61.6 39 76.9
Peaxi162Scf00637g00213 Petunia axillaris HOM05D000181 ORTHO05D004115 4.8e-08 61.6 39 76.9
Psat0ss1279g0480 Pisum sativum HOM05D000181 ORTHO05D004115 4.8e-08 61.6 38 81.6
Potri.006G227700 Populus trichocarpa HOM05D000181 ORTHO05D004115 4.8e-08 61.6 39 76.9
Sp4g06130 Schrenkiella parvula HOM05D000181 ORTHO05D004115 4.8e-08 61.6 39 74.4
AT2G26140 Arabidopsis thaliana HOM05D000181 ORTHO05D004115 6.3e-08 61.2 39 74.4
Carub.0004s0599 Capsella rubella HOM05D000181 ORTHO05D004115 6.3e-08 61.2 44 70.5
CAN.G309.48 Capsicum annuum HOM05D000181 ORTHO05D004115 6.3e-08 61.2 38 76.3
Solyc11g069950.2 Solanum lycopersicum HOM05D000181 ORTHO05D004115 6.3e-08 61.2 38 76.3
Sopen11g028630 Solanum pennellii HOM05D000181 ORTHO05D004115 6.3e-08 61.2 38 76.3
Glyma.17G228100 Glycine max HOM05D000181 ORTHO05D004115 8.2e-08 60.8 39 74.4
HanXRQChr13g0410561 Helianthus annuus HOM05D000181 ORTHO05D004115 8.2e-08 60.8 39 79.5
Oeu003989.1 Olea europaea HOM05D000181 ORTHO05D004115 8.2e-08 60.8 39 74.4
unitig_26.g9799 Utricularia gibba HOM05D000181 ORTHO05D004115 8.2e-08 60.8 74 48.6
Atru.chr7.1092 Acer truncatum HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 76.9
AL4G18380 Arabidopsis lyrata HOM05D000181 ORTHO05D004115 1.1e-07 60.5 81 45.7
EL10Ac2g03856 Beta vulgaris HOM05D000181 ORTHO05D004115 1.1e-07 60.5 38 76.3
ClCG05G017900 Citrullus lanatus HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 76.9
FvH4_2g31730 Fragaria vesca HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 79.5
FAN15G2475 Fragaria x ananassa HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 79.5
FAN24G2478 Fragaria x ananassa HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 79.5
FAN27G0883 Fragaria x ananassa HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 79.5
Lsat_1_v5_gn_5_47461 Lactuca sativa HOM05D000181 ORTHO05D004115 1.1e-07 60.5 39 74.4
AUR62039121 Chenopodium quinoa HOM05D000181 ORTHO05D004115 1.8e-07 59.7 38 76.3
Hund03332 Selenicereus undatus HOM05D000181 ORTHO05D004115 1.8e-07 59.7 40 70.0
Ca_15861_v3 Cicer arietinum L. HOM05D000181 ORTHO05D004115 2.4e-07 59.3 38 76.3
DCAR_007730 Daucus carota HOM05D000181 ORTHO05D004115 2.4e-07 59.3 39 76.9
TPR.G3550 Trifolium pratense HOM05D000181 ORTHO05D004115 2.4e-07 59.3 38 76.3
Lalb_Chr23g0267791 Lupinus albus HOM05D000181 ORTHO05D004115 3.1e-07 58.9 38 76.3
Hund19446 Selenicereus undatus HOM05D000181 ORTHO05D004115 3.1e-07 58.9 38 73.7
arahy.Tifrunner.gnm1.ann1.0K8AZ2 Arachis hypogaea HOM05D000181 ORTHO05D004115 4.1e-07 58.5 38 73.7
arahy.Tifrunner.gnm1.ann1.UJ20FY Arachis hypogaea HOM05D000181 ORTHO05D004115 4.1e-07 58.5 38 73.7
AUR62009133 Chenopodium quinoa HOM05D000181 ORTHO05D004115 4.1e-07 58.5 38 76.3
ECA233G2186 Erigeron canadensis HOM05D000181 ORTHO05D004115 4.1e-07 58.5 39 69.2
MD15G1058500 Malus domestica HOM05D000181 ORTHO05D004115 4.1e-07 58.5 60 55.0
PSO210G2213 Papaver somniferum HOM05D000181 ORTHO05D004115 5.3e-07 58.2 49 63.3
CANSAT25G3685 Cannabis sativa HOM05D000181 ORTHO05D004115 7.0e-07 57.8 39 74.4
Migut.E01568 Erythranthe guttata HOM05D000181 ORTHO05D004115 7.0e-07 57.8 37 81.1
Medtr3g104470 Medicago truncatula HOM05D000181 ORTHO05D004115 7.0e-07 57.8 38 73.7
Ca_11788_v3 Cicer arietinum L. HOM05D000181 ORTHO05D004115 9.1e-07 57.4 38 73.7
ECA240G3295 Erigeron canadensis HOM05D000181 ORTHO05D004115 1.2e-06 57.0 39 69.2
Medtr8g469440 Medicago truncatula HOM05D000181 ORTHO05D004115 1.2e-06 57.0 86 41.9
SalBow4G2318 Salvia bowleyana HOM05D000181 ORTHO05D004115 1.2e-06 57.0 39 69.2
SEGI_20342 Sequoiadendron giganteum HOM05D000181 ORTHO05D004115 1.2e-06 57.0 39 71.8
Actinidia14721 Actinidia chinensis HOM05D000181 ORTHO05D004115 1.5e-06 56.6 40 75.0
Lj1g0003102 Lotus japonicus HOM05D000181 ORTHO05D004115 1.5e-06 56.6 38 73.7
DCAR_004410 Daucus carota HOM05D000181 ORTHO05D004115 2.6e-06 55.8 39 71.8
Medtr3g104480 Medicago truncatula HOM05D000181 ORTHO05D004115 2.6e-06 55.8 84 42.9
SHI18729 Sapria himalayana HOM05D000181 ORTHO05D004115 2.6e-06 55.8 38 71.1
Mapoly0031s0044 Marchantia polymorpha HOM05D000181 ORTHO05D004115 3.4e-06 55.5 38 71.1
Psat0s934g0080 Pisum sativum HOM05D000181 ORTHO05D004115 3.4e-06 55.5 81 44.4
Rhsim07G0141900 Rhododendron simsii HOM05D000181 ORTHO05D004115 3.4e-06 55.5 32 84.4
Os01g0574400 Oryza sativa ssp. japonica HOM05D000181 ORTHO05D004115 4.5e-06 55.1 39 71.8
Nitab4.5_0000227g0010 Nicotiana tabacum HOM05D000181 ORTHO05D004115 5.9e-06 54.7 39 69.2


User provided reference genes

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