Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 1.1e-175 619.8 292 100.0
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 2.0e-97 359.8 239 76.2
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 2.3e-85 319.7 237 65.4
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 4.4e-84 315.5 237 62.4
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 1.4e-82 310.5 237 63.7
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 9.2e-82 307.8 237 64.1
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 1.3e-80 303.9 237 62.4
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 2.9e-80 302.8 237 62.4
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 8.6e-80 301.2 237 61.6
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 1.1e-79 300.8 286 52.8
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 1.5e-79 300.4 237 60.8
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 3.3e-79 299.3 237 61.2
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 4.3e-79 298.9 237 61.6
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 9.5e-79 297.7 266 54.5
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 9.5e-79 297.7 237 61.2
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 1.2e-78 297.4 237 59.5
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 1.2e-78 297.4 237 59.9
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 2.1e-78 296.6 237 59.5
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 6.1e-78 295.0 237 60.3
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 8.0e-78 294.7 237 60.3
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 8.0e-78 294.7 237 61.2
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 1.0e-77 294.3 237 60.3
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 1.8e-77 293.5 237 59.5
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 2.3e-77 293.1 237 59.5
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 3.0e-77 292.7 237 59.9
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 4.0e-77 292.4 256 57.8
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 5.2e-77 292.0 237 59.1
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 8.9e-77 291.2 238 59.7
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 8.9e-77 291.2 238 59.7
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 8.9e-77 291.2 237 58.6
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 1.2e-76 290.8 237 59.9
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 1.2e-76 290.8 237 59.9
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 1.2e-76 290.8 237 59.5
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.5e-76 290.4 237 59.1
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 2.0e-76 290.0 237 59.9
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 2.0e-76 290.0 239 60.3
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 2.0e-76 290.0 247 58.3
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 2.6e-76 289.7 237 58.6
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 4.4e-76 288.9 237 59.1
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 7.5e-76 288.1 238 59.2
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 9.8e-76 287.7 237 58.6
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 9.8e-76 287.7 238 58.4
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 9.8e-76 287.7 237 59.9
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 1.3e-75 287.3 237 57.4
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 1.3e-75 287.3 237 58.6
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 2.2e-75 286.6 237 59.5
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 2.2e-75 286.6 238 58.4
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 2.2e-75 286.6 238 58.0
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 2.2e-75 286.6 238 58.0
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 2.9e-75 286.2 240 57.5
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 2.9e-75 286.2 237 59.5
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 3.7e-75 285.8 237 59.1
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 4.9e-75 285.4 238 59.7
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 4.9e-75 285.4 237 58.2
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 4.9e-75 285.4 237 57.8
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 4.9e-75 285.4 237 59.1
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 6.4e-75 285.0 237 57.8
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 6.4e-75 285.0 238 58.8
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 6.4e-75 285.0 237 58.6
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 6.4e-75 285.0 237 57.8
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 8.3e-75 284.6 237 59.1
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 1.1e-74 284.3 267 51.3
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 1.1e-74 284.3 237 59.1
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.4e-74 283.9 237 58.6
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.4e-74 283.9 237 58.6
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 1.4e-74 283.9 237 57.8
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 1.8e-74 283.5 237 57.4
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 3.2e-74 282.7 237 56.1
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 3.2e-74 282.7 237 58.6
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 5.4e-74 282.0 237 56.1
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 5.4e-74 282.0 237 58.2
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 7.0e-74 281.6 237 56.5
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 7.0e-74 281.6 267 52.4
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 9.2e-74 281.2 237 57.4
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 9.2e-74 281.2 237 57.0
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 9.2e-74 281.2 237 58.6
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 58.6
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 56.1
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 56.1
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 56.1
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 56.5
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 57.4
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 1.2e-73 280.8 237 58.2
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 1.6e-73 280.4 246 55.7
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 2.7e-73 279.6 237 58.2
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 2.7e-73 279.6 237 58.2
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 2.7e-73 279.6 237 56.5
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 3.5e-73 279.3 237 58.6
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 3.5e-73 279.3 237 57.0
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 4.6e-73 278.9 237 56.5
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 4.6e-73 278.9 237 57.4
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 7.8e-73 278.1 238 56.7
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 7.8e-73 278.1 235 57.9
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 7.8e-73 278.1 237 56.5
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 1.0e-72 277.7 237 56.5
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.0e-72 277.7 246 55.3
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 1.0e-72 277.7 246 56.9
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 1.7e-72 276.9 257 54.5
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 1.7e-72 276.9 237 58.2
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 2.3e-72 276.6 238 57.6
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 3.0e-72 276.2 237 57.4
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 3.3e-71 272.7 237 55.3
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 4.3e-71 272.3 237 55.7
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 5.6e-71 271.9 237 57.0
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 7.3e-71 271.6 237 56.1
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 1.2e-70 270.8 239 56.1
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 2.1e-70 270.0 237 55.3
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 2.8e-70 269.6 237 55.7
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 4.7e-70 268.9 237 56.1
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 8.0e-70 268.1 237 56.5
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 1.8e-69 266.9 246 53.7
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 3.1e-69 266.2 283 49.5
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 5.2e-69 265.4 263 51.7
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 2.6e-68 263.1 237 54.4
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 2.6e-68 263.1 291 48.8
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 3.4e-68 262.7 237 53.6
Oeu014529.1 Olea europaea HOM05D003473 ORTHO05D003872 7.5e-68 261.5 200 63.5
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 2.9e-67 259.6 239 53.6
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 3.7e-67 259.2 237 54.0
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 6.4e-67 258.5 238 55.5
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 1.6e-65 253.8 237 52.7
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 6.0e-65 251.9 237 53.2
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 5.0e-64 248.8 171 73.1
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 7.5e-60 235.0 239 51.5
unitig_749.g14017 Utricularia gibba HOM05D003473 ORTHO05D003872 1.6e-54 217.2 142 70.4
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 3.6e-54 216.1 142 71.1
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 1.2e-52 211.1 246 45.9
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 9.9e-52 208.0 202 52.0
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 1.3e-51 207.6 237 48.1
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 8.4e-51 204.9 314 39.5
SGA_v2.0_scaffold158G37441 Striga asiatica HOM05D003473 ORTHO05D003872 1.4e-50 204.1 134 76.9
Psat6g143640 Pisum sativum HOM05D003473 ORTHO05D003872 8.6e-48 194.9 142 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.8e-46 189.9 239 42.7
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 3.1e-45 186.4 244 47.1
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 5.2e-45 185.7 238 41.6
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.3e-43 181.0 235 38.3
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.7e-43 180.6 238 39.1
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 6.4e-43 178.7 243 39.9
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.6e-41 174.1 137 60.6
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.9e-39 167.2 238 39.1
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.3e-39 166.0 241 38.6
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 5.6e-39 165.6 239 40.2
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.1e-38 163.7 241 37.3
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 2.1e-38 163.7 263 39.9
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.4e-37 161.0 290 35.9
SEGI_32914 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 5.8e-36 155.6 125 57.6
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.2e-35 153.7 238 35.7
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.9e-35 153.3 239 36.8
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.9e-35 152.5 236 36.9
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.4e-35 151.8 238 34.9
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 8.4e-35 151.8 172 50.0
Actinidia38934 Actinidia chinensis HOM05D003473 ORTHO05D003872 2.7e-33 146.7 106 65.1
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 6.0e-33 145.6 185 44.9
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.1e-31 141.4 238 36.6
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 5.6e-31 139.0 237 35.4
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 1.2e-28 131.3 250 31.2
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 4.6e-25 119.4 249 30.1
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.9e-25 118.6 241 34.9
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.9e-19 100.1 237 31.2
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.5e-18 97.1 76 56.6
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-17 94.7 77 57.1
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.2e-17 94.7 231 28.6
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.6e-17 94.4 76 57.9
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 2.1e-17 94.0 280 27.1
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.1e-17 94.0 87 51.7
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 2.1e-17 94.0 87 50.6
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.5e-17 93.2 76 53.9
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 2.3e-16 90.5 104 46.2
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 5.1e-16 89.4 73 60.3
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 6.7e-16 89.0 179 35.2
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.1e-15 88.2 76 51.3
CBR_g48367 Chara braunii HOM05D003473 ORTHO05D003872 3.7e-14 83.2 284 29.2
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 3.7e-14 83.2 73 50.7
GSVIVG01023448001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.4e-13 81.3 48 75.0
CBR_g23900 Chara braunii HOM05D003473 ORTHO05D003872 4.5e-12 76.3 292 26.4
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.2e-10 70.1 63 52.4
DCAR_030014 Daucus carota HOM05D003473 ORTHO05D003872 5.1e-08 62.8 46 65.2
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 2.5e-07 60.5 62 40.3
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 2.5e-07 60.5 62 40.3
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 2.5e-07 60.5 62 40.3
Rhsim09G0136600 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.7e-06 56.6 29 75.9
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.2e-06 55.5 40 57.5


User provided reference genes

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