Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold127G34001 Striga asiatica HOM05D035478 ORTHO05D401266 0.0e+00 1669.1 876 100.0
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 3.4e-249 865.5 980 55.3
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 2.8e-118 430.6 600 45.5
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 7.9e-12 77.0 244 20.1
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 9.0e-08 63.5 161 24.2
SGA_v2.0_scaffold81G26003 Striga asiatica HOM05D017631 ORTHO05D009908 1.0e-06 60.1 226 24.3
Atru.chr5.2872 Acer truncatum HOM05D000823 ORTHO05D000088 1.3e-06 59.7 106 29.2
RcHm_v2.0_Chr6g0259881 Rosa chinensis HOM05D000823 ORTHO05D000088 1.3e-06 59.7 84 36.9
FAN24G0466 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.7e-06 59.3 114 31.6
Os01g0723700 Oryza sativa ssp. japonica HOM05D000823 ORTHO05D000088 2.2e-06 58.9 90 34.4
AUR62011403 Chenopodium quinoa HOM05D000395 ORTHO05D000088 2.9e-06 58.5 139 28.8
FvH4_4g19990 Fragaria vesca HOM05D000823 ORTHO05D009132 3.8e-06 58.2 139 26.6
SGA_v2.0_scaffold24G10573 Striga asiatica HOM05D000823 ORTHO05D000088 3.8e-06 58.2 79 38.0
Actinidia15278 Actinidia chinensis HOM05D000823 ORTHO05D000088 6.5e-06 57.4 145 27.6
MBI16_g31478_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 8.4e-06 57.0 105 29.5


User provided reference genes

Program Settings