Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05819 Striga asiatica HOM05D001749 ORTHO05D001632 2.6e-113 412.1 221 100.0
SGA_v2.0_scaffold201G41384 Striga asiatica HOM05D001749 ORTHO05D001632 1.9e-47 193.4 234 52.1
Migut.C00753 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.0e-37 161.0 235 45.1
MSTRG.25190 Avicennia marina HOM05D001749 ORTHO05D001632 3.9e-32 142.5 243 42.4
MSTRG.24281 Avicennia marina HOM05D001749 ORTHO05D001632 8.6e-32 141.4 221 47.1
SalBow8G3194 Salvia bowleyana HOM05D001749 ORTHO05D001632 6.8e-29 131.7 242 41.7
SalBow8G4985 Salvia bowleyana HOM05D001749 ORTHO05D001632 6.8e-29 131.7 242 41.7
Oeu030425.2 Olea europaea HOM05D001749 ORTHO05D001632 1.1e-26 124.4 253 39.1
Oeu063612.1 Olea europaea HOM05D001749 ORTHO05D001632 1.1e-26 124.4 252 36.5
SGA_v2.0_scaffold328G48815 Striga asiatica HOM05D001749 ORTHO05D001632 2.7e-25 119.8 231 41.1
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-20 104.0 235 34.9
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 2.6e-20 103.2 236 35.6
Lj4C36T10 Lonicera japonica HOM05D001749 ORTHO05D001632 1.7e-19 100.5 238 39.1
Cc10_g02570 Coffea canephora HOM05D001749 ORTHO05D001632 6.4e-19 98.6 246 34.6
CAN.G1226.48 Capsicum annuum HOM05D001749 ORTHO05D001632 1.9e-18 97.1 238 35.3
Peaxi162Scf00140g00031 Petunia axillaris HOM05D001749 ORTHO05D001632 4.1e-18 95.9 229 35.8
unitig_578.g16076 Utricularia gibba HOM05D001749 ORTHO05D001632 2.7e-17 93.2 227 33.0
Solyc04g080640.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 1.3e-16 90.9 241 34.0
PGSC0003DMG400003697 Solanum tuberosum HOM05D001749 ORTHO05D001632 3.0e-16 89.7 242 34.3
Sopen04g034230 Solanum pennellii HOM05D001749 ORTHO05D001632 3.9e-16 89.4 241 33.6
Nitab4.5_0003265g0050 Nicotiana tabacum HOM05D001749 ORTHO05D001632 5.1e-16 89.0 248 35.9
CSS0005210 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 8.6e-16 88.2 228 34.6
unitig_8.g4930 Utricularia gibba HOM05D001749 ORTHO05D001632 8.6e-16 88.2 221 31.7
Dinv39444 Davidia involucrata HOM05D001749 ORTHO05D001632 1.9e-15 87.0 238 31.9
Nitab4.5_0009228g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 4.3e-15 85.9 247 33.6
Rhsim06G0030100 Rhododendron simsii HOM05D001749 ORTHO05D001632 4.0e-13 79.3 234 33.3
Lsat_1_v5_gn_4_117861 Lactuca sativa HOM05D001749 ORTHO05D001632 1.5e-12 77.4 242 33.1
DCAR_013834 Daucus carota HOM05D001749 ORTHO05D001632 2.6e-12 76.6 234 32.5
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.6e-12 76.6 228 31.6
HanXRQChr09g0268971 Helianthus annuus HOM05D001749 ORTHO05D001632 3.4e-12 76.3 270 28.9
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 1.3e-11 74.3 218 33.9
HanXRQChr13g0395401 Helianthus annuus HOM05D001749 ORTHO05D001632 8.4e-11 71.6 231 30.7
Nitab4.5_0000746g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 2.1e-09 67.0 242 27.7
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.1e-09 67.0 229 29.7
HanXRQChr04g0103991 Helianthus annuus HOM05D001749 ORTHO05D001632 4.6e-09 65.9 229 28.4
Peaxi162Scf00303g00092 Petunia axillaris HOM05D001749 ORTHO05D001632 4.6e-09 65.9 230 28.7
HanXRQChr16g0501491 Helianthus annuus HOM05D001749 ORTHO05D001632 6.0e-09 65.5 234 31.6
Lsat_1_v5_gn_5_27281 Lactuca sativa HOM05D001749 ORTHO05D001632 7.8e-09 65.1 236 29.7
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 7.8e-09 65.1 220 30.0
Actinidia22524 Actinidia chinensis HOM05D001749 ORTHO05D001632 2.3e-08 63.5 210 29.5
DCAR_022466 Daucus carota HOM05D001749 ORTHO05D001632 3.0e-08 63.2 242 29.8
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 6.6e-08 62.0 223 29.6
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 8.6e-08 61.6 215 29.3
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 4.3e-07 59.3 236 26.7
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 4.3e-07 59.3 230 28.3
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 5.6e-07 58.9 241 29.5
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 5.6e-07 58.9 227 31.7
Gohir.A10G096200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 9.6e-07 58.2 225 28.9
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 9.6e-07 58.2 222 30.2
HPP92_023425 Vanilla planifolia HOM05D001749 ORTHO05D001632 9.6e-07 58.2 228 31.1
Gorai.011G100900 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.6e-06 57.4 225 28.9
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.1e-06 57.0 222 30.2
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 2.1e-06 57.0 230 27.8
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.8e-06 56.6 222 30.2
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 3.6e-06 56.2 218 30.7
Gohir.D10G091900 Gossypium hirsutum HOM05D001749 ORTHO05D001632 3.6e-06 56.2 225 28.9
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 3.6e-06 56.2 225 28.9
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 4.7e-06 55.8 226 27.4


User provided reference genes

Program Settings