Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05758 Striga asiatica HOM05D007701 ORTHO05D006440 3.8e-65 251.5 142 100.0
Migut.D00227 Erythranthe guttata HOM05D007701 ORTHO05D006440 3.8e-17 92.0 148 48.0
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 2.2e-12 76.3 123 48.0
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 2.8e-12 75.9 79 60.8
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 8.3e-12 74.3 102 51.0
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 1.4e-11 73.6 101 47.5
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 1.8e-11 73.2 102 50.0
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 1.2e-10 70.5 90 53.3
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 1.6e-10 70.1 76 55.3
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 7.8e-10 67.8 99 48.5
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 1.3e-09 67.0 111 49.5
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 5.0e-09 65.1 100 47.0
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 5.0e-09 65.1 103 48.5
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 5.0e-09 65.1 111 48.6
Ca_10375_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 6.6e-09 64.7 103 48.5
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 6.6e-09 64.7 92 47.8
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 1.9e-08 63.2 125 40.8
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 2.5e-08 62.8 129 41.9
Thecc.01G290700 Theobroma cacao HOM05D007701 ORTHO05D006440 5.6e-08 61.6 129 42.6
CANSAT25G3325 Cannabis sativa HOM05D007701 ORTHO05D006440 9.5e-08 60.8 127 40.2
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 9.5e-08 60.8 127 40.2
Sc19g0004910 Simmondsia chinensis HOM05D007701 ORTHO05D006440 9.5e-08 60.8 127 38.6
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 2.1e-07 59.7 117 43.6
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 3.6e-07 58.9 86 48.8
SalBow6G6224 Salvia bowleyana HOM05D007701 ORTHO05D006440 4.7e-07 58.5 112 47.3
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 1.0e-06 57.4 102 42.2
Psat6g167920 Pisum sativum HOM05D007701 ORTHO05D006440 1.8e-06 56.6 94 41.5
TPR.G16944 Trifolium pratense HOM05D007701 ORTHO05D006440 2.3e-06 56.2 131 41.2
Aa31LG1G29360 Aethionema arabicum HOM05D011411 ORTHO05D006440 8.9e-06 54.3 89 44.9
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 8.9e-06 54.3 108 40.7


User provided reference genes

Program Settings