Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 4.8e-180 634.4 327 100.0
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 5.6e-104 381.7 359 61.8
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 1.9e-91 340.1 367 55.0
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 3.2e-83 312.8 368 52.7
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 7.1e-83 311.6 346 55.5
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 3.3e-80 302.8 359 51.3
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 3.1e-78 296.2 333 52.9
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 4.0e-78 295.8 351 52.4
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 5.3e-78 295.4 352 52.0
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 6.9e-78 295.0 354 50.3
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.5e-77 293.9 357 49.9
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.0e-77 293.5 347 50.1
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 2.0e-77 293.5 354 51.4
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 2.6e-77 293.1 347 51.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 2.2e-76 290.0 359 49.9
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 2.2e-76 290.0 354 50.6
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 4.9e-76 288.9 349 51.0
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 6.4e-76 288.5 341 51.9
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 6.4e-76 288.5 363 49.0
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 8.4e-76 288.1 356 49.7
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.9e-75 287.0 336 49.4
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 3.2e-75 286.2 353 51.0
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 5.4e-75 285.4 333 49.5
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 9.3e-75 284.6 362 49.4
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 2.1e-74 283.5 359 47.6
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 2.1e-74 283.5 360 50.0
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 1.3e-73 280.8 346 50.0
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 6.7e-73 278.5 316 52.2
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-72 277.3 261 58.6
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.5e-72 276.6 327 51.1
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 7.4e-72 275.0 357 49.0
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 9.6e-72 274.6 346 47.4
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.1e-71 273.5 353 48.2
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 2.8e-71 273.1 297 53.5
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 2.8e-71 273.1 267 57.7
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 3.7e-71 272.7 325 48.6
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 4.8e-71 272.3 355 48.5
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 4.8e-71 272.3 323 50.2
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 6.2e-71 271.9 260 57.7
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 6.2e-71 271.9 344 48.8
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.1e-70 271.2 363 48.5
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 3.1e-70 269.6 332 48.5
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 3.1e-70 269.6 360 47.5
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 4.0e-70 269.2 362 48.1
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 4.0e-70 269.2 364 48.4
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 9.0e-70 268.1 355 47.9
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 1.2e-69 267.7 347 48.4
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.5e-69 267.3 328 50.0
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 4.5e-69 265.8 364 47.3
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 5.8e-69 265.4 336 49.1
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 5.8e-69 265.4 352 47.2
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.0e-68 264.6 360 46.7
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.3e-68 264.2 365 47.9
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.3e-68 264.2 416 42.5
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 2.9e-68 263.1 354 47.5
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.8e-68 262.7 317 50.2
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 4.9e-68 262.3 333 49.2
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 4.9e-68 262.3 333 47.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.4e-67 260.8 322 49.4
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 2.5e-67 260.0 353 48.7
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 2.5e-67 260.0 222 60.4
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 7.1e-67 258.5 352 48.6
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 1.2e-66 257.7 331 48.3
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.2e-66 257.7 352 48.3
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.3e-65 254.2 334 45.2
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.3e-65 253.4 349 47.3
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 1.1e-64 251.1 327 47.4
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 1.5e-64 250.8 353 46.2
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.5e-64 250.8 324 44.8
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.5e-64 250.0 323 44.6
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 2.0e-61 240.4 329 44.1
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.7e-60 237.3 326 44.8
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 6.5e-60 235.3 212 59.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.1e-59 234.6 345 42.9
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 4.2e-59 232.6 205 59.0
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 9.3e-59 231.5 334 44.3
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.0e-57 228.0 310 46.8
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.8e-57 227.3 270 51.1
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 4.3e-56 222.6 214 53.3
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 9.7e-56 221.5 207 57.5
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 6.3e-55 218.8 207 53.6
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 1.4e-54 217.6 214 55.1
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.0e-53 213.8 280 48.6
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 4.5e-53 212.6 294 47.3
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.0e-52 211.5 325 40.6
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 6.5e-52 208.8 294 45.2
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 6.5e-52 208.8 325 44.6
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 8.8e-49 198.4 182 54.4
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.3e-44 184.5 254 39.0
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 2.9e-36 156.8 191 45.5
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.2e-34 151.4 165 50.3
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 4.7e-34 149.4 154 53.2
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 8.0e-34 148.7 99 69.7
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.4e-33 147.9 194 50.0
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 4.0e-33 146.4 109 65.1
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.7e-31 141.0 92 71.7
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 4.8e-31 139.4 261 35.2
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 3.8e-28 129.8 160 49.4
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 4.4e-24 116.3 81 76.5
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 4.4e-24 116.3 82 65.9
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 4.4e-24 116.3 96 58.3
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 9.4e-19 98.6 201 38.3
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.4e-17 94.7 121 46.3
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.4e-17 94.7 121 46.3
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 6.8e-17 92.4 121 45.5
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 6.3e-15 85.9 141 43.3
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 3.8e-12 76.6 95 36.8
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-11 74.7 140 41.4
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.2e-10 71.6 41 85.4
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.1e-10 70.9 41 85.4
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.1e-10 70.9 47 72.3
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.2e-08 65.1 101 40.6
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 2.6e-08 63.9 284 23.2
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 4.9e-07 59.7 51 60.8
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 6.4e-07 59.3 123 35.0
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 5.4e-06 56.2 38 71.1


User provided reference genes

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