Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0545000 Oryza sativa ssp. japonica HOM05D024050 ORTHO05D298706 2.5e-192 675.2 341 100.0
Os11g0580500 Oryza sativa ssp. japonica HOM05D024050 ORTHO05D301234 5.1e-108 395.2 335 65.1
Os12g0299700 Oryza sativa ssp. japonica HOM05D024050 ORTHO05D299198 1.9e-62 243.8 302 43.4
Os02g0511800 Oryza sativa ssp. japonica HOM05D024050 ORTHO05D294995 9.1e-57 224.9 302 42.7
Os11g0544900 Oryza sativa ssp. japonica HOM05D024050 ORTHO05D299750 4.5e-48 196.1 99 97.0
Os12g0622900 Oryza sativa ssp. japonica HOM05D004250 ORTHO05D005264 1.0e-15 88.6 169 30.2
Os12g0621900 Oryza sativa ssp. japonica HOM05D004250 ORTHO05D005264 2.1e-13 80.9 209 28.7
Nn4g25988 Nelumbo nucifera HOM05D001386 ORTHO05D003791 1.4e-12 78.2 245 27.3
Nn3g21323 Nelumbo nucifera HOM05D001386 ORTHO05D003791 2.3e-12 77.4 245 26.9
Os03g0350100 Oryza sativa ssp. japonica HOM05D001386 ORTHO05D003791 2.3e-12 77.4 246 26.4
Os03g0350300 Oryza sativa ssp. japonica HOM05D001386 ORTHO05D003791 2.3e-12 77.4 246 26.4
Medtr5g010260 Medicago truncatula HOM05D001386 ORTHO05D003791 6.8e-12 75.9 246 27.6
vmacro21508 Vaccinium macrocarpon HOM05D001386 ORTHO05D003791 6.8e-12 75.9 245 27.3
CiPaw.07G010000 Carya illinoinensis HOM05D001386 ORTHO05D003791 8.9e-12 75.5 283 25.1
Zm00001eb016780 Zea mays HOM05D001386 ORTHO05D003791 8.9e-12 75.5 246 25.6
Zm00001eb394750 Zea mays HOM05D001386 ORTHO05D003791 8.9e-12 75.5 246 25.6
Oeu014982.1 Olea europaea HOM05D001386 ORTHO05D003791 2.0e-11 74.3 277 26.0
Zm00001eb031420 Zea mays HOM05D001386 ORTHO05D003791 2.0e-11 74.3 183 29.0
Dinv04272 Davidia involucrata HOM05D001386 ORTHO05D003791 2.6e-11 73.9 245 26.9
CSS0026520 Camellia sinensis var. sinensis HOM05D001386 ORTHO05D003791 3.4e-11 73.6 245 26.5
Cc07_g18220 Coffea canephora HOM05D001386 ORTHO05D003791 3.4e-11 73.6 245 26.9
Zm00001eb293910 Zea mays HOM05D001386 ORTHO05D003791 3.4e-11 73.6 183 28.4
Nitab4.5_0001498g0030 Nicotiana tabacum HOM05D001386 ORTHO05D003791 4.4e-11 73.2 242 27.7
TWI36G0019 Tripterygium wilfordii HOM05D001386 ORTHO05D003791 4.4e-11 73.2 246 26.0
TAR365G0043 Trochodendron aralioides HOM05D001386 ORTHO05D003791 4.4e-11 73.2 245 27.3
Actinidia05751 Actinidia chinensis HOM05D001386 ORTHO05D003791 7.6e-11 72.4 245 26.5
MBI10_g32325_MAGBIO Magnolia biondii HOM05D001386 ORTHO05D003791 7.6e-11 72.4 282 26.2
MBI16_g04494_MAGBIO Magnolia biondii HOM05D001386 ORTHO05D003791 7.6e-11 72.4 282 26.2
Solyc09g083080.4 Solanum lycopersicum HOM05D001386 ORTHO05D003791 9.9e-11 72.0 242 27.7
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 9.9e-11 72.0 245 26.1
GSVIVG01021905001 Vitis vinifera HOM05D001386 ORTHO05D003791 9.9e-11 72.0 245 26.1
arahy.Tifrunner.gnm1.ann1.0BY36D Arachis hypogaea HOM05D001386 ORTHO05D003791 1.3e-10 71.6 240 25.8
arahy.Tifrunner.gnm1.ann1.1D22H7 Arachis hypogaea HOM05D001386 ORTHO05D003791 1.3e-10 71.6 240 25.8
Nitab4.5_0006530g0030 Nicotiana tabacum HOM05D001386 ORTHO05D003791 1.3e-10 71.6 242 27.3
PGSC0003DMG400006104 Solanum tuberosum HOM05D001386 ORTHO05D003791 1.3e-10 71.6 242 27.3
Manes.08G126100 Manihot esculenta HOM05D001386 ORTHO05D003791 1.7e-10 71.2 243 26.3
Sopen09g031960 Solanum pennellii HOM05D001386 ORTHO05D003791 1.7e-10 71.2 242 27.7
TAR362G0211 Trochodendron aralioides HOM05D001386 ORTHO05D003791 2.2e-10 70.9 246 26.0
VMungo1127G1099 Vigna mungo HOM05D001386 ORTHO05D003791 2.2e-10 70.9 245 25.3
Zm00001eb364220 Zea mays HOM05D001386 ORTHO05D003791 2.2e-10 70.9 251 25.5
Aqoxy2G03112 Aquilegia oxysepala HOM05D001386 ORTHO05D003791 2.9e-10 70.5 252 25.8
CAN.G4.12 Capsicum annuum HOM05D001386 ORTHO05D003791 2.9e-10 70.5 246 27.2
Haze_25199 Corylus avellana HOM05D001386 ORTHO05D003791 2.9e-10 70.5 283 24.7
Manes.09G158900 Manihot esculenta HOM05D001386 ORTHO05D003791 2.9e-10 70.5 241 26.1
Cfa002871 Carpinus fangiana HOM05D001386 ORTHO05D003791 3.8e-10 70.1 283 24.7
HanXRQChr14g0451691 Helianthus annuus HOM05D001386 ORTHO05D003791 3.8e-10 70.1 245 26.1
Lalb_Chr01g0002321 Lupinus albus HOM05D001386 ORTHO05D003791 3.8e-10 70.1 220 26.4
PSO210G6000 Papaver somniferum HOM05D001386 ORTHO05D003791 3.8e-10 70.1 253 26.1
TWI12G1393 Tripterygium wilfordii HOM05D001386 ORTHO05D003791 3.8e-10 70.1 246 25.2
EL10Ac8g19379 Beta vulgaris HOM05D001386 ORTHO05D003791 4.9e-10 69.7 246 26.8
Phvul.011G042200 Phaseolus vulgaris HOM05D001386 ORTHO05D003791 4.9e-10 69.7 240 24.6
Lj7A481T49 Lonicera japonica HOM05D001386 ORTHO05D003791 6.4e-10 69.3 245 25.3
Prupe.6G336300 Prunus persica HOM05D001386 ORTHO05D003791 6.4e-10 69.3 245 24.9
Aqoxy5G00645 Aquilegia oxysepala HOM05D001386 ORTHO05D003791 1.1e-09 68.6 244 25.0
Ciclev10000758m.g Citrus clementina HOM05D001386 ORTHO05D003791 1.1e-09 68.6 245 25.7
Glyma.12G040200 Glycine max HOM05D001386 ORTHO05D003791 1.1e-09 68.6 241 25.3
Lalb_Chr03g0025521 Lupinus albus HOM05D001386 ORTHO05D003791 1.1e-09 68.6 220 25.9
PSO170G5816 Papaver somniferum HOM05D001386 ORTHO05D003791 1.1e-09 68.6 241 25.7
Glyma.11G114300 Glycine max HOM05D001386 ORTHO05D003791 1.4e-09 68.2 240 25.0
Oeu064438.1 Olea europaea HOM05D001386 ORTHO05D016069 1.4e-09 68.2 165 29.1
Hund14661 Selenicereus undatus HOM05D001386 ORTHO05D003791 2.4e-09 67.4 248 26.2
AUR62005026 Chenopodium quinoa HOM05D001386 ORTHO05D003791 3.2e-09 67.0 245 26.1
ClCG02G016300 Citrullus lanatus HOM05D001386 ORTHO05D003791 4.1e-09 66.6 241 24.9
AUR62000941 Chenopodium quinoa HOM05D001386 ORTHO05D003791 5.4e-09 66.2 245 26.1
vmacro19664 Vaccinium macrocarpon HOM05D001386 ORTHO05D003791 5.4e-09 66.2 165 29.1
Atru.chr1.4168 Acer truncatum HOM05D001386 ORTHO05D003791 7.1e-09 65.9 245 25.3
EL10Ac4g09229 Beta vulgaris HOM05D001386 ORTHO05D003791 2.1e-08 64.3 209 26.8
HanXRQChr02g0043391 Helianthus annuus HOM05D001386 ORTHO05D016069 3.0e-07 60.5 162 27.2


User provided reference genes

Program Settings