Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0070201 Lupinus albus HOM05D002864 ORTHO05D007972 4.5e-42 174.1 83 100.0
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 8.5e-17 90.1 82 62.2
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 2.5e-16 88.6 84 63.1
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lsat_1_v5_gn_0_44400 Lactuca sativa HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lj2C1221T24 Lonicera japonica HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 4.2e-16 87.8 82 61.0
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 4.2e-16 87.8 82 62.2
arahy.Tifrunner.gnm1.ann1.76QWAA Arachis hypogaea HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
arahy.Tifrunner.gnm1.ann1.BSNJ2C Arachis hypogaea HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
arahy.Tifrunner.gnm1.ann1.L9JJXJ Arachis hypogaea HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
arahy.Tifrunner.gnm1.ann1.N2KMKI Arachis hypogaea HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
ClCG07G004380 Citrullus lanatus HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 5.5e-16 87.4 82 61.0
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
HanXRQChr00c0055g0571421 Helianthus annuus HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
Sopen01g028720 Solanum pennellii HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 1.2e-15 86.3 82 59.8
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 1.6e-15 85.9 82 59.8
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 1.6e-15 85.9 84 63.1
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 2.1e-15 85.5 82 59.8
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 2.7e-15 85.1 46 87.0
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 8.0e-15 83.6 46 84.8
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 8.0e-15 83.6 46 84.8
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 8.0e-15 83.6 43 90.7
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 8.0e-15 83.6 43 90.7
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 8.0e-15 83.6 43 90.7
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 8.0e-15 83.6 43 90.7
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 8.0e-15 83.6 43 90.7
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
Sp3g25700 Schrenkiella parvula HOM05D002864 ORTHO05D007972 1.8e-14 82.4 84 61.9
GSVIVG01018702001 Vitis vinifera HOM05D002864 ORTHO05D007972 4.0e-14 81.3 43 88.4
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 5.2e-14 80.9 82 56.1
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 8.8e-14 80.1 82 56.1
Gohir.A01G126732 Gossypium hirsutum HOM05D002864 ORTHO05D007972 1.5e-13 79.3 82 56.1
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 2.0e-13 79.0 82 57.3
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 2.6e-13 78.6 84 59.5
Glyma.05G092000 Glycine max HOM05D002864 ORTHO05D007972 5.7e-13 77.4 46 78.3
HanXRQChr17g0558551 Helianthus annuus HOM05D002864 ORTHO05D007972 7.5e-13 77.0 43 83.7
SHI06511 Sapria himalayana HOM05D002864 ORTHO05D007972 8.3e-12 73.6 46 73.9
Nitab4.5_0024895g0020 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.4e-11 72.8 49 73.5
SEGI_33420 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 1.8e-11 72.4 43 79.1
Nitab4.5_0029129g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 3.1e-11 71.6 49 71.4
SEGI_14242 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 3.1e-11 71.6 83 53.0
GSVIVG01012279001 Vitis vinifera HOM05D002864 ORTHO05D007972 3.1e-11 71.6 61 59.0
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 5.4e-11 70.9 84 57.1
Hma1.2p1_0676F.1_g201980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 5.4e-11 70.9 37 89.2
Nitab4.5_0000120g0110 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.2e-10 69.7 70 57.1
SHI33967 Sapria himalayana HOM05D002864 ORTHO05D007972 2.2e-09 65.5 31 93.5
Haze_27081 Corylus avellana HOM05D002864 ORTHO05D007972 2.9e-09 65.1 82 46.3
Nitab4.5_0009373g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.9e-08 62.4 42 71.4
Nn8g39946 Nelumbo nucifera HOM05D002864 ORTHO05D007972 7.2e-08 60.5 33 84.8


User provided reference genes

Program Settings