Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.2e-107 393.3 216 100.0
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.2e-91 340.1 174 90.8
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 2.3e-90 335.9 171 91.2
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.0e-90 335.1 171 91.2
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 6.8e-90 334.3 177 88.1
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 8.8e-90 334.0 169 91.7
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.0e-89 332.8 169 91.7
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.0e-89 332.8 169 91.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.6e-89 332.4 169 91.7
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.4e-89 332.0 169 91.1
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 9.8e-89 330.5 169 91.1
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 3.7e-88 328.6 166 90.4
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 6.3e-88 327.8 170 88.8
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 6.3e-88 327.8 177 85.9
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 8.3e-88 327.4 169 88.8
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.1e-87 327.0 175 85.1
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.4e-87 326.6 168 91.1
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 3.1e-87 325.5 175 85.1
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 4.1e-87 325.1 175 85.1
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 5.4e-87 324.7 180 84.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.4e-87 324.7 179 82.7
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 7.0e-87 324.3 176 84.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 7.0e-87 324.3 175 84.6
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 9.1e-87 323.9 175 84.6
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 9.1e-87 323.9 168 88.1
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 9.1e-87 323.9 168 89.9
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 9.1e-87 323.9 170 88.2
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.2e-86 323.6 167 88.6
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.6e-86 323.2 175 84.6
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.6e-86 323.2 173 85.5
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.0e-86 322.8 164 90.2
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 2.0e-86 322.8 170 86.5
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.7e-86 322.4 176 83.5
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.7e-86 322.4 176 83.5
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.7e-86 322.4 176 83.5
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.7e-86 322.4 176 83.5
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.7e-86 322.4 176 83.5
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.7e-86 322.4 168 88.1
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.7e-86 322.4 166 89.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.7e-86 322.4 168 87.5
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 2.7e-86 322.4 167 86.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 3.5e-86 322.0 176 84.1
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.5e-86 322.0 176 84.1
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 3.5e-86 322.0 176 84.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.5e-86 322.0 176 84.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 3.5e-86 322.0 176 84.1
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 3.5e-86 322.0 180 82.8
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 3.5e-86 322.0 170 85.3
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 3.5e-86 322.0 179 83.2
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.5e-86 321.6 175 83.4
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 4.5e-86 321.6 176 83.5
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 4.5e-86 321.6 177 84.2
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.5e-86 321.6 161 90.7
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 4.5e-86 321.6 161 90.7
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 4.5e-86 321.6 179 83.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 4.5e-86 321.6 179 83.2
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 5.9e-86 321.2 166 89.2
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 7.7e-86 320.9 175 85.7
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.0e-85 320.5 165 87.9
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.0e-85 320.5 170 85.3
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.3e-85 320.1 177 85.9
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.7e-85 319.7 170 88.2
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.2e-85 319.3 167 88.6
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.9e-85 318.9 160 90.6
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.9e-85 318.9 166 87.3
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 3.8e-85 318.5 166 88.6
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 3.8e-85 318.5 175 85.1
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.8e-85 318.5 175 85.1
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 5.0e-85 318.2 171 85.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 8.5e-85 317.4 166 87.3
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.1e-84 317.0 159 89.9
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.5e-84 316.6 169 85.8
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.5e-84 315.8 184 82.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 2.5e-84 315.8 170 84.1
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 2.5e-84 315.8 159 89.9
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 3.2e-84 315.5 167 83.8
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.2e-84 315.5 179 80.4
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 3.2e-84 315.5 163 87.7
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 4.2e-84 315.1 161 89.4
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 4.2e-84 315.1 169 85.2
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 9.4e-84 313.9 161 88.2
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.6e-83 313.2 160 88.1
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.1e-83 312.8 179 79.3
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.7e-83 312.4 162 87.0
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.7e-83 312.4 171 82.5
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 3.6e-83 312.0 166 84.9
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.6e-83 312.0 158 88.0
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 6.1e-83 311.2 167 85.6
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.0e-82 310.5 167 85.0
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.3e-82 309.3 165 84.8
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.5e-81 306.6 170 83.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 3.4e-81 305.4 158 87.3
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.8e-79 299.7 161 85.1
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-79 299.7 175 77.7
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 2.4e-79 299.3 170 80.0
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.0e-79 297.7 175 77.1
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-78 295.4 175 76.6
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 3.5e-78 295.4 209 68.4
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 4.5e-78 295.0 157 85.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-78 294.7 170 78.2
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.1e-76 290.4 161 82.6
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.5e-76 290.0 169 80.5
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.5e-76 289.3 163 79.1
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 2.1e-75 286.2 171 77.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.8e-75 285.8 168 75.6
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.7e-75 285.0 149 86.6
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 1.0e-74 283.9 168 75.6
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.4e-74 283.5 149 88.6
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-74 283.1 168 75.0
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 8.9e-74 280.8 156 81.4
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.2e-73 280.4 168 75.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 5.7e-73 278.1 167 75.4
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 6.4e-72 274.6 168 72.0
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.4e-72 274.6 168 72.0
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-71 273.9 192 66.7
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 4.1e-71 271.9 161 75.8
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.2e-71 270.8 174 69.5
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.6e-67 260.0 160 72.5
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 8.0e-67 257.7 145 80.0
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 6.8e-66 254.6 160 72.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.5e-65 253.4 146 81.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.6e-65 252.7 160 71.9
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.2e-64 249.6 144 76.4
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.1e-63 247.3 127 87.4
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.4e-58 230.3 112 95.5
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 3.2e-55 219.2 112 88.4
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 5.1e-53 211.8 115 84.3
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.3e-52 208.0 105 87.6
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.3e-52 208.0 105 87.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.6e-51 206.8 114 82.5
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.0e-45 187.6 113 71.7
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-42 177.6 168 52.4
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.0e-41 173.3 92 85.9
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 6.9e-34 148.3 103 64.1
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 3.4e-25 119.4 62 88.7
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-23 114.0 56 94.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.3e-21 107.5 62 79.0
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.4e-18 97.4 60 70.0
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 1.0e-13 81.3 46 80.4
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 7.9e-06 55.1 36 75.0


User provided reference genes

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