Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 1.1e-117 426.8 228 100.0
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.3e-94 350.1 231 80.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 8.8e-56 221.1 232 55.2
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.3e-54 217.2 226 53.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 2.2e-54 216.5 231 52.4
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.4e-53 213.8 231 51.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 3.1e-53 212.6 232 50.9
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.1e-53 212.6 232 50.9
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 4.1e-53 212.2 233 54.5
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 4.1e-53 212.2 225 52.9
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 5.3e-53 211.8 232 50.9
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 5.9e-52 208.4 235 51.1
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 5.9e-52 208.4 228 53.9
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 1.3e-51 207.2 221 55.2
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.2e-51 206.5 225 49.8
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 2.2e-51 206.5 212 53.3
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.2e-51 206.5 231 48.9
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 8.5e-51 204.5 231 52.4
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.9e-50 203.4 247 51.4
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.9e-50 203.4 237 51.5
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 4.2e-50 202.2 234 51.7
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 5.5e-50 201.8 233 50.6
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 9.4e-50 201.1 245 50.6
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.1e-49 199.9 229 50.7
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 3.6e-49 199.1 214 53.7
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.4e-48 197.2 210 52.4
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.4e-48 197.2 238 50.4
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.0e-47 193.4 219 51.6
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.7e-46 190.3 209 50.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 4.8e-46 188.7 210 51.0
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 3.1e-45 186.0 214 50.0
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.7e-43 180.3 179 57.5
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 2.9e-43 179.5 245 44.9
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 2.9e-43 179.5 215 51.2
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 5.0e-43 178.7 179 56.4
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.1e-42 177.6 226 47.8
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.5e-42 176.4 232 46.1
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.2e-42 175.6 213 47.4
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.6e-41 173.7 214 48.1
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 2.7e-41 172.9 175 54.9
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.4e-40 170.6 218 45.9
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.5e-39 167.2 208 47.6
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.6e-39 166.4 217 46.5
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 4.4e-39 165.6 205 48.8
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 4.4e-39 165.6 219 46.1
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 5.7e-39 165.2 217 47.0
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 5.7e-39 165.2 237 45.6
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 9.8e-39 164.5 219 45.7
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 1.3e-38 164.1 215 46.5
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.8e-38 162.9 215 46.5
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.8e-38 162.9 215 46.5
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 4.9e-38 162.2 219 45.2
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 6.3e-38 161.8 209 44.5
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 6.3e-38 161.8 219 45.7
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 5.4e-37 158.7 217 45.6
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.7e-35 153.7 180 50.6
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 8.6e-35 151.4 142 57.0
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 2.0e-31 140.2 164 49.4
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.4e-31 139.4 162 51.9
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 4.4e-31 139.0 185 44.9
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 3.2e-29 132.9 186 40.9
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.8e-24 117.1 117 59.0
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 3.4e-23 112.8 216 33.8
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.1e-21 107.8 203 34.5
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 6.0e-20 102.1 161 46.0
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 6.2e-17 92.0 105 52.4
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.4e-16 90.9 134 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 4.4e-15 85.9 195 28.2
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.3e-14 84.3 188 31.4
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.9e-14 83.2 97 50.5
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.4e-14 82.0 166 36.1
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 7.1e-13 78.6 171 33.3
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.2e-12 77.8 207 30.0
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 2.3e-11 73.6 104 40.4
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.1e-10 71.2 62 61.3
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.9e-10 70.5 63 65.1
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 2.5e-10 70.1 116 37.1
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.2e-06 57.0 114 29.8


User provided reference genes

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