Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337111 Helianthus annuus HOM05D007321 ORTHO05D009244 5.9e-275 950.3 489 100.0
ECA236G2671 Erigeron canadensis HOM05D007321 ORTHO05D009244 1.8e-215 752.7 490 78.4
Lsat_1_v5_gn_7_80180 Lactuca sativa HOM05D007321 ORTHO05D009244 6.8e-215 750.7 493 79.9
Nitab4.5_0007385g0020 Nicotiana tabacum HOM05D007321 ORTHO05D009244 1.8e-191 672.9 487 70.8
Lj5P243T60 Lonicera japonica HOM05D007321 ORTHO05D009244 2.2e-189 666.0 459 72.5
Solyc02g083410.4 Solanum lycopersicum HOM05D007321 ORTHO05D009244 1.1e-188 663.7 481 70.7
Sopen02g028190 Solanum pennellii HOM05D007321 ORTHO05D009244 2.5e-188 662.5 481 70.7
Nitab4.5_0002105g0030 Nicotiana tabacum HOM05D007321 ORTHO05D009244 1.6e-187 659.8 487 69.6
PGSC0003DMG400003660 Solanum tuberosum HOM05D007321 ORTHO05D009244 8.7e-186 654.1 457 72.6
Dinv19324 Davidia involucrata HOM05D007321 ORTHO05D009244 6.2e-184 647.9 468 69.4
Actinidia28071 Actinidia chinensis HOM05D007321 ORTHO05D009244 9.0e-183 644.0 442 73.1
Rhsim05G0110900 Rhododendron simsii HOM05D007321 ORTHO05D009244 2.2e-181 639.4 458 71.2
Oeu037200.1 Olea europaea HOM05D007321 ORTHO05D009244 2.5e-180 636.0 459 69.7
Peaxi162Scf00328g00127 Petunia axillaris HOM05D007321 ORTHO05D009244 3.5e-179 632.1 473 67.4
Eucgr.I02693 Eucalyptus grandis HOM05D007321 ORTHO05D009244 3.9e-178 628.6 479 65.8
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 6.7e-178 627.9 453 71.3
Gorai.012G140200 Gossypium raimondii HOM05D007321 ORTHO05D009244 1.1e-177 627.1 451 69.2
Migut.B00640 Erythranthe guttata HOM05D007321 ORTHO05D009244 1.5e-177 626.7 462 69.0
Glyma.05G120300 Glycine max HOM05D007321 ORTHO05D009244 1.5e-177 626.7 453 70.2
Cc02_g21870 Coffea canephora HOM05D007321 ORTHO05D009244 1.9e-177 626.3 463 68.9
Gohir.D04G153300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 2.5e-177 625.9 451 69.2
CiPaw.05G039000 Carya illinoinensis HOM05D007321 ORTHO05D009244 3.3e-177 625.5 460 68.7
VMungo0251G3312 Vigna mungo HOM05D007321 ORTHO05D009244 9.7e-177 624.0 493 65.9
Phvul.002G206500 Phaseolus vulgaris HOM05D007321 ORTHO05D009244 4.8e-176 621.7 487 65.5
Manes.16G135300 Manihot esculenta HOM05D007321 ORTHO05D009244 1.1e-175 620.5 490 64.9
Aqoxy6G00494 Aquilegia oxysepala HOM05D007321 ORTHO05D009244 1.8e-175 619.8 485 66.4
Gohir.A04G112300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 1.8e-175 619.8 452 68.8
Nn1g05198 Nelumbo nucifera HOM05D007321 ORTHO05D009244 3.1e-175 619.0 450 71.8
Lj4g0025169 Lotus japonicus HOM05D007321 ORTHO05D009244 4.1e-175 618.6 441 70.7
MSTRG.16564 Avicennia marina HOM05D007321 ORTHO05D009244 1.2e-174 617.1 462 67.5
GSVIVG01029706001 Vitis vinifera HOM05D007321 ORTHO05D009244 1.2e-174 617.1 449 67.9
Duzib052G0820 Durio zibethinus HOM05D007321 ORTHO05D009244 1.5e-174 616.7 444 69.6
TWI59G1034 Tripterygium wilfordii HOM05D007321 ORTHO05D009244 1.5e-174 616.7 454 67.8
Cfa005577 Carpinus fangiana HOM05D007321 ORTHO05D009244 2.6e-174 615.9 459 68.0
DCAR_021840 Daucus carota HOM05D000446 ORTHO05D000321 2.6e-174 615.9 451 68.3
Potri.001G344800 Populus trichocarpa HOM05D007321 ORTHO05D009244 2.6e-174 615.9 448 68.5
Medtr4g094295 Medicago truncatula HOM05D007321 ORTHO05D009244 5.0e-173 611.7 485 65.6
Thecc.02G143600 Theobroma cacao HOM05D007321 ORTHO05D009244 6.5e-173 611.3 453 68.2
MD03G1054600 Malus domestica HOM05D007321 ORTHO05D009244 1.1e-172 610.5 462 66.2
Sabra16G0223900 Salix brachista HOM05D007321 ORTHO05D009244 4.2e-172 608.6 462 68.0
Psat1g188000 Pisum sativum HOM05D007321 ORTHO05D009244 1.6e-171 606.7 486 64.8
PGR142G0984 Punica granatum HOM05D007321 ORTHO05D009244 2.1e-171 606.3 450 68.0
Lalb_Chr07g0189441 Lupinus albus HOM05D007321 ORTHO05D009244 2.7e-171 605.9 439 67.4
QL11p019400 Quercus lobata HOM05D007321 ORTHO05D009244 4.6e-171 605.1 455 66.8
FAN11G3563 Fragaria x ananassa HOM05D007321 ORTHO05D009244 7.4e-169 597.8 444 66.7
FAN16G2899 Fragaria x ananassa HOM05D007321 ORTHO05D009244 7.4e-169 597.8 444 66.7
RcHm_v2.0_Chr5g0072531 Rosa chinensis HOM05D007321 ORTHO05D009244 9.7e-169 597.4 455 66.4
FAN25G3421 Fragaria x ananassa HOM05D007321 ORTHO05D009244 1.3e-168 597.0 460 65.2
Atru.chr6.902 Acer truncatum HOM05D007321 ORTHO05D009244 3.7e-168 595.5 481 63.2
FvH4_3g40270 Fragaria vesca HOM05D007321 ORTHO05D009244 3.7e-168 595.5 460 65.4
FAN21G2259 Fragaria x ananassa HOM05D007321 ORTHO05D009244 8.2e-168 594.3 460 65.0
SGA_v2.0_scaffold332G48942 Striga asiatica HOM05D007321 ORTHO05D009244 2.4e-167 592.8 462 66.5
BcaC05g29686 Brassica carinata HOM05D007321 ORTHO05D009244 6.9e-167 591.3 439 67.7
CARHR083990 Cardamine hirsuta HOM05D007321 ORTHO05D009244 9.1e-167 590.9 435 66.7
Ciclev10004047m.g Citrus clementina HOM05D007321 ORTHO05D009244 2.6e-166 589.3 433 67.4
Prupe.6G043200 Prunus persica HOM05D007321 ORTHO05D009244 4.5e-166 588.6 468 64.5
A05p39470 Brassica napus HOM05D007321 ORTHO05D009244 1.3e-165 587.0 464 65.1
BraA05t22728Z Brassica rapa HOM05D007321 ORTHO05D009244 1.7e-165 586.6 464 64.7
MELO3C009790.2 Cucumis melo HOM05D007321 ORTHO05D009244 1.7e-165 586.6 456 64.5
AL3G20750 Arabidopsis lyrata HOM05D007321 ORTHO05D009244 2.2e-165 586.3 435 66.4
ClCG10G015890 Citrullus lanatus HOM05D007321 ORTHO05D009244 3.8e-165 585.5 439 66.1
CANSAT80G1420 Cannabis sativa HOM05D007321 ORTHO05D009244 6.5e-165 584.7 446 65.9
SalBow5G3411 Salvia bowleyana HOM05D007321 ORTHO05D009244 6.5e-165 584.7 461 66.2
THA.LOC104826997 Tarenaya hassleriana HOM05D007321 ORTHO05D009244 6.5e-165 584.7 435 68.0
C05p58490 Brassica napus HOM05D007321 ORTHO05D009244 8.5e-165 584.3 462 64.7
BolC5t34500H Brassica oleracea HOM05D007321 ORTHO05D009244 8.5e-165 584.3 462 64.9
AT3G09580 Arabidopsis thaliana HOM05D007321 ORTHO05D009244 3.2e-164 582.4 436 65.6
PSO541G5651 Papaver somniferum HOM05D007321 ORTHO05D009244 5.5e-164 581.6 452 67.3
Sp3g07930 Schrenkiella parvula HOM05D007321 ORTHO05D009244 1.2e-163 580.5 454 64.1
Sed0000618 Sechium edule HOM05D007321 ORTHO05D009244 2.7e-163 579.3 456 64.5
Carub.0003s0867 Capsella rubella HOM05D007321 ORTHO05D009244 7.9e-163 577.8 440 65.5
CsaV3_3G040590 Cucumis sativus L. HOM05D007321 ORTHO05D009244 1.0e-162 577.4 431 65.7
Ah.14g085390 Amaranthus hybridus HOM05D007321 ORTHO05D009244 6.7e-162 574.7 457 63.2
MBI05_g36588_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 8.8e-162 574.3 453 65.8
EL10Ac8g19338 Beta vulgaris HOM05D007321 ORTHO05D009244 2.0e-161 573.2 443 66.1
CSS0020188 Camellia sinensis var. sinensis HOM05D007321 ORTHO05D009244 1.1e-159 567.4 452 64.8
Thhalv10003042m.g Eutrema salsugineum HOM05D007321 ORTHO05D009244 1.1e-159 567.4 447 63.3
Aa31LG3G2030 Aethionema arabicum HOM05D007321 ORTHO05D009244 1.6e-158 563.5 455 62.4
PSO675G7953 Papaver somniferum HOM05D007321 ORTHO05D009244 7.7e-158 561.2 441 64.6
Sc14g0002750 Simmondsia chinensis HOM05D007321 ORTHO05D009244 1.1e-153 547.4 464 60.3
AUR62027387 Chenopodium quinoa HOM05D007321 ORTHO05D009244 4.4e-153 545.4 404 66.8
SEGI_02418 Sequoiadendron giganteum HOM05D007321 ORTHO05D009244 1.0e-149 534.3 429 61.1
ATR0580G200 Amborella trichopoda HOM05D007321 ORTHO05D009244 1.5e-148 530.4 460 60.2
CDE06G0306 Ceratophyllum demersum HOM05D007321 ORTHO05D009244 4.8e-144 515.4 488 55.7
Pp3c2_19910 Physcomitrium patens HOM05D007321 ORTHO05D009244 1.4e-143 513.8 430 58.6
Mapoly0005s0009 Marchantia polymorpha HOM05D007321 ORTHO05D009244 1.2e-139 500.7 449 56.6
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 1.6e-139 500.4 375 67.5
SMO116G0156 Selaginella moellendorffii HOM05D007321 ORTHO05D009244 2.4e-135 486.5 429 56.9
TPR.G10452 Trifolium pratense HOM05D007321 ORTHO05D009244 5.6e-132 475.3 372 63.2
Zm00001eb328010 Zea mays HOM05D007321 ORTHO05D009244 1.2e-121 441.0 459 52.3
AagrBONN_evm.TU.Sc2ySwM_344.1849 Anthoceros agrestis HOM05D007321 ORTHO05D009244 1.1e-119 434.5 429 50.6
Cre12.g560900 Chlamydomonas reinhardtii HOM05D007321 ORTHO05D009244 1.1e-114 417.9 429 51.3
Os07g0626800 Oryza sativa ssp. japonica HOM05D007321 ORTHO05D009244 5.2e-114 415.6 402 53.7
TAR381G1665 Trochodendron aralioides HOM05D007321 ORTHO05D009244 6.2e-107 392.1 303 68.0
CBR_g49724 Chara braunii HOM05D007321 ORTHO05D009244 3.4e-105 386.3 453 45.5
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 5.4e-103 379.0 420 48.3
MCO04G135 Micromonas commoda HOM05D007321 ORTHO05D009244 4.0e-98 362.8 465 44.5
CAN.G890.33 Capsicum annuum HOM05D007321 ORTHO05D009244 8.9e-98 361.7 450 46.4
Cpa.g.sc52.12 Carica papaya HOM05D007321 ORTHO05D009244 2.9e-96 356.7 268 66.4
MBI05_g44827_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 1.1e-84 318.2 314 56.7
AagrBONN_evm.TU.Sc2ySwM_344.1850 Anthoceros agrestis HOM05D007321 ORTHO05D009244 7.9e-70 268.9 219 58.4
unitig_8.g3471 Utricularia gibba HOM05D007321 ORTHO05D009244 1.0e-69 268.5 189 69.3
AUR62031301 Chenopodium quinoa HOM05D007321 ORTHO05D009244 2.2e-51 207.6 143 68.5
unitig_8.g3470 Utricularia gibba HOM05D007321 ORTHO05D009244 3.7e-51 206.8 148 64.9
MBI05_g44826_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 4.0e-37 160.2 117 65.8
HPP92_016846 Vanilla planifolia HOM05D007321 ORTHO05D009244 1.2e-25 122.1 109 53.2
TAR381G1585 Trochodendron aralioides HOM05D007321 ORTHO05D009244 2.8e-22 110.9 86 60.5
Lalb_Chr23g0278241 Lupinus albus HOM05D002360 ORTHO05D006971 1.4e-10 72.0 476 20.8
CANSAT78G1063 Cannabis sativa HOM05D002360 ORTHO05D006971 3.2e-10 70.9 471 21.2
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 4.6e-09 67.0 486 20.8
Nn3g19797 Nelumbo nucifera HOM05D007321 ORTHO05D009244 1.3e-08 65.5 51 62.7
PSO135G0108 Papaver somniferum HOM05D002360 ORTHO05D006971 2.3e-08 64.7 470 19.6
SMO165G0055 Selaginella moellendorffii HOM05D007163 ORTHO05D009213 3.3e-07 60.8 177 28.2
arahy.Tifrunner.gnm1.ann1.YX4IN3 Arachis hypogaea HOM05D001254 ORTHO05D001386 7.3e-07 59.7 282 24.5
Pp3c1_4180 Physcomitrium patens HOM05D007163 ORTHO05D009213 7.3e-07 59.7 176 26.1
BcaB08g36967 Brassica carinata HOM05D007163 ORTHO05D009213 9.5e-07 59.3 173 29.5
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 9.5e-07 59.3 173 28.3
BraA10t44490Z Brassica rapa HOM05D007163 ORTHO05D009213 1.2e-06 58.9 182 25.8
TPR.G38344 Trifolium pratense HOM05D007163 ORTHO05D009213 1.6e-06 58.5 173 27.2
A10p24250 Brassica napus HOM05D007163 ORTHO05D009213 2.1e-06 58.2 173 27.7
C09p62940 Brassica napus HOM05D007163 ORTHO05D009213 2.8e-06 57.8 173 27.7
BolC9t59131H Brassica oleracea HOM05D007163 ORTHO05D009213 2.8e-06 57.8 173 27.7
CDE06G2307 Ceratophyllum demersum HOM05D002360 ORTHO05D006971 2.8e-06 57.8 460 20.9
BcaC04g19052 Brassica carinata HOM05D007163 ORTHO05D009213 3.6e-06 57.4 173 27.7
Nn3g16518 Nelumbo nucifera HOM05D007163 ORTHO05D009213 3.6e-06 57.4 177 25.4
AL6G24890 Arabidopsis lyrata HOM05D007163 ORTHO05D009213 8.0e-06 56.2 173 27.2
GSVIVG01020812001 Vitis vinifera HOM05D000461 ORTHO05D001840 8.0e-06 56.2 139 31.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (3 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings