Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0325481 Helianthus annuus HOM05D001900 ORTHO05D003003 1.5e-66 256.1 138 100.0
Lj4A204T64 Lonicera japonica HOM05D001900 ORTHO05D003003 2.2e-33 146.0 155 56.1
HanXRQChr09g0261371 Helianthus annuus HOM05D001900 ORTHO05D003003 5.0e-30 134.8 124 62.1
CANSAT01G3259 Cannabis sativa HOM05D001900 ORTHO05D003003 1.2e-28 130.2 188 46.3
GSVIVG01018933001 Vitis vinifera HOM05D001900 ORTHO05D003003 1.2e-28 130.2 187 46.0
Duzib264G0068 Durio zibethinus HOM05D001900 ORTHO05D003003 1.6e-28 129.8 187 46.0
Haze_15069 Corylus avellana HOM05D001900 ORTHO05D003003 2.8e-28 129.0 186 45.7
Dinv40001 Davidia involucrata HOM05D001900 ORTHO05D003003 6.1e-28 127.9 187 45.5
PGR102G2818 Punica granatum HOM05D001900 ORTHO05D003003 1.4e-27 126.7 187 45.5
Actinidia36571 Actinidia chinensis HOM05D001900 ORTHO05D003003 1.8e-27 126.3 209 41.6
Solyc02g085060.2 Solanum lycopersicum HOM05D001900 ORTHO05D003003 1.8e-27 126.3 165 46.7
Aqoxy6G01148 Aquilegia oxysepala HOM05D001900 ORTHO05D003003 2.3e-27 125.9 186 43.5
Thecc.01G032400 Theobroma cacao HOM05D001900 ORTHO05D003003 2.3e-27 125.9 187 46.0
Cpa.g.sc6.141 Carica papaya HOM05D001900 ORTHO05D003003 3.0e-27 125.6 187 43.9
Potri.005G120901 Populus trichocarpa HOM05D001900 ORTHO05D003003 3.0e-27 125.6 187 46.0
Ciclev10024944m.g Citrus clementina HOM05D001900 ORTHO05D003003 5.2e-27 124.8 187 45.5
Sopen02g029760 Solanum pennellii HOM05D001900 ORTHO05D003003 5.2e-27 124.8 187 44.4
Atru.chr3.618 Acer truncatum HOM05D001900 ORTHO05D003003 6.8e-27 124.4 181 45.9
Potri.007G022900 Populus trichocarpa HOM05D001900 ORTHO05D003003 6.8e-27 124.4 187 46.0
Gohir.A12G063900 Gossypium hirsutum HOM05D001900 ORTHO05D003003 8.9e-27 124.0 187 45.5
MBI10_g18272_MAGBIO Magnolia biondii HOM05D001900 ORTHO05D003003 8.9e-27 124.0 182 46.2
Manes.01G137000 Manihot esculenta HOM05D001900 ORTHO05D003003 1.2e-26 123.6 182 45.1
Gohir.D12G063800 Gossypium hirsutum HOM05D001900 ORTHO05D003003 3.4e-26 122.1 187 44.9
PSO675G4582 Papaver somniferum HOM05D001900 ORTHO05D003003 3.4e-26 122.1 186 45.2
Actinidia16034 Actinidia chinensis HOM05D001900 ORTHO05D003003 4.4e-26 121.7 165 46.7
Prupe.7G157200 Prunus persica HOM05D001900 ORTHO05D003003 4.4e-26 121.7 187 44.4
Gorai.008G067000 Gossypium raimondii HOM05D001900 ORTHO05D003003 7.5e-26 120.9 187 44.4
Nitab4.5_0007490g0030 Nicotiana tabacum HOM05D001900 ORTHO05D003003 7.5e-26 120.9 161 46.6
TWI53G0889 Tripterygium wilfordii HOM05D001900 ORTHO05D003003 7.5e-26 120.9 186 43.0
CSS0012592 Camellia sinensis var. sinensis HOM05D001900 ORTHO05D003003 3.7e-25 118.6 153 49.0
Lj2C455T8 Lonicera japonica HOM05D001900 ORTHO05D003003 3.7e-25 118.6 187 44.4
Eucgr.H03317 Eucalyptus grandis HOM05D001900 ORTHO05D003003 4.9e-25 118.2 182 44.0
PSO541G0976 Papaver somniferum HOM05D001900 ORTHO05D003003 1.1e-24 117.1 186 43.5
FAN19G1137 Fragaria x ananassa HOM05D001900 ORTHO05D003003 1.8e-24 116.3 186 43.5
TAR381G1572 Trochodendron aralioides HOM05D001900 ORTHO05D003003 2.4e-24 115.9 156 47.4
FAN26G2681 Fragaria x ananassa HOM05D001900 ORTHO05D003003 5.4e-24 114.8 186 43.0
MD02G1144400 Malus domestica HOM05D001900 ORTHO05D003003 7.0e-24 114.4 156 46.8
FvH4_1g12990 Fragaria vesca HOM05D001900 ORTHO05D003003 9.2e-24 114.0 186 43.0
ATR0568G141 Amborella trichopoda HOM05D001900 ORTHO05D003003 1.2e-23 113.6 186 40.9
Duzib147G0909 Durio zibethinus HOM05D001900 ORTHO05D003003 1.2e-23 113.6 185 43.8
FAN28G0904 Fragaria x ananassa HOM05D001900 ORTHO05D003003 2.7e-23 112.5 186 42.5
Migut.L00022 Erythranthe guttata HOM05D001900 ORTHO05D003003 3.5e-23 112.1 188 41.5
FAN23G0213 Fragaria x ananassa HOM05D001900 ORTHO05D003003 3.5e-23 112.1 186 42.5
DCAR_025953 Daucus carota HOM05D001900 ORTHO05D003003 4.6e-23 111.7 185 41.6
Cc07_g09770 Coffea canephora HOM05D001900 ORTHO05D003003 5.9e-23 111.3 187 41.2
CAN.G358.59 Capsicum annuum HOM05D001900 ORTHO05D003003 1.0e-22 110.5 165 43.0
Os02g0704966 Oryza sativa ssp. japonica HOM05D001900 ORTHO05D003003 1.3e-22 110.2 186 40.3
COL.COLO4_22048 Corchorus olitorius HOM05D001900 ORTHO05D003003 2.3e-22 109.4 212 39.2
Phvul.002G032800 Phaseolus vulgaris HOM05D001900 ORTHO05D003003 3.9e-22 108.6 187 41.2
Lsat_1_v5_gn_4_152521 Lactuca sativa HOM05D001900 ORTHO05D003003 1.1e-21 107.1 103 64.1
ClCG01G019690 Citrullus lanatus HOM05D001900 ORTHO05D003003 1.9e-21 106.3 184 39.7
Gorai.003G013700 Gossypium raimondii HOM05D001900 ORTHO05D003003 3.3e-21 105.5 194 39.7
MD15G1258100 Malus domestica HOM05D001900 ORTHO05D003003 3.3e-21 105.5 153 43.8
Zm00001eb188350 Zea mays HOM05D001900 ORTHO05D003003 3.3e-21 105.5 185 38.9
CsaV3_6G046400 Cucumis sativus L. HOM05D001900 ORTHO05D003003 4.3e-21 105.1 187 39.0
Gohir.D03G013400 Gossypium hirsutum HOM05D001900 ORTHO05D003003 4.3e-21 105.1 194 39.7
VMungo1215G0025 Vigna mungo HOM05D001900 ORTHO05D003003 4.3e-21 105.1 187 39.6
Glyma.01G172500 Glycine max HOM05D001900 ORTHO05D003003 2.8e-20 102.4 187 39.6
Gohir.A02G166600 Gossypium hirsutum HOM05D001900 ORTHO05D003003 2.8e-20 102.4 194 39.2
Glyma.11G070700 Glycine max HOM05D001900 ORTHO05D003003 1.8e-19 99.8 187 38.5
RcHm_v2.0_Chr2g0101071 Rosa chinensis HOM05D001900 ORTHO05D003003 1.8e-19 99.8 152 43.4
ECA232G3627 Erigeron canadensis HOM05D002962 ORTHO05D003003 2.3e-19 99.4 117 55.6
Medtr5g020810 Medicago truncatula HOM05D001900 ORTHO05D003003 3.1e-19 99.0 187 37.4
Ca_24869_v3 Cicer arietinum L. HOM05D001900 ORTHO05D003003 5.2e-19 98.2 116 47.4
Psat2g158040 Pisum sativum HOM05D001900 ORTHO05D003003 2.0e-18 96.3 187 38.0
Peaxi162Scf00366g00532 Petunia axillaris HOM05D001900 ORTHO05D003003 3.4e-18 95.5 101 58.4
Lj2g0000438 Lotus japonicus HOM05D001900 ORTHO05D003003 1.7e-17 93.2 187 37.4
Sed0014260 Sechium edule HOM05D001900 ORTHO05D003003 8.3e-17 90.9 156 39.1
Cfa004333 Carpinus fangiana HOM05D001900 ORTHO05D003003 2.1e-12 76.3 111 44.1
CiPaw.02G019500 Carya illinoinensis HOM05D001900 ORTHO05D003003 4.7e-12 75.1 142 45.1
MELO3C007837.2 Cucumis melo HOM05D001900 ORTHO05D003003 6.2e-12 74.7 99 46.5
TAR625G0256 Trochodendron aralioides HOM05D001900 ORTHO05D003003 2.3e-11 72.8 44 84.1
SEGI_23362 Sequoiadendron giganteum HOM05D001900 ORTHO05D003003 4.0e-11 72.0 124 37.1
Nitab4.5_0000178g0240 Nicotiana tabacum HOM05D001900 ORTHO05D003003 6.8e-11 71.2 44 81.8
QL06p046951 Quercus lobata HOM05D001900 ORTHO05D003003 8.9e-11 70.9 44 81.8
SalBow5G0358 Salvia bowleyana HOM05D001900 ORTHO05D003003 1.7e-09 66.6 44 75.0
SalBow5G2022 Salvia bowleyana HOM05D001900 ORTHO05D003003 2.9e-09 65.9 44 75.0
Dinv13503 Davidia involucrata HOM05D001900 ORTHO05D003003 3.7e-09 65.5 73 56.2
Migut.H02534 Erythranthe guttata HOM05D001900 ORTHO05D003003 3.7e-09 65.5 44 75.0
Nitab4.5_0007770g0010 Nicotiana tabacum HOM05D001900 ORTHO05D003003 6.4e-09 64.7 46 69.6
Oeu012897.2 Olea europaea HOM05D001900 ORTHO05D003003 6.4e-09 64.7 45 73.3
VMungo0251G3648 Vigna mungo HOM05D000030 ORTHO05D000009 6.4e-09 64.7 83 50.6
arahy.Tifrunner.gnm1.ann1.1IN98U Arachis hypogaea HOM05D000342 ORTHO05D000217 7.8e-07 57.8 43 67.4
Eucgr.A02138 Eucalyptus grandis HOM05D001900 ORTHO05D003003 1.3e-06 57.0 163 27.6
Peaxi162Scf00010g01323 Petunia axillaris HOM05D001900 ORTHO05D003003 2.3e-06 56.2 77 42.9
TPR.G2395 Trifolium pratense HOM05D001900 ORTHO05D003003 3.9e-06 55.5 44 61.4
MD02G1230000 Malus domestica HOM05D001900 ORTHO05D009822 5.1e-06 55.1 66 48.5


User provided reference genes

Program Settings