Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 9.3e-52 206.8 123 100.0
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 5.7e-17 91.3 60 70.0
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 1.7e-16 89.7 58 72.4
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 4.8e-16 88.2 43 90.7
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 1.4e-15 86.7 58 69.0
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 1.4e-15 86.7 44 88.6
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 1.8e-15 86.3 50 78.0
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 1.8e-15 86.3 50 78.0
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.8e-15 86.3 71 59.2
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 4.1e-15 85.1 46 80.4
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 4.1e-15 85.1 46 78.3
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 4.1e-15 85.1 46 80.4
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 4.1e-15 85.1 50 76.0
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 5.3e-15 84.7 46 82.6
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 6.9e-15 84.3 44 84.1
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 9.1e-15 84.0 46 78.3
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 9.1e-15 84.0 48 75.0
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.5e-14 83.2 53 75.5
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 2.6e-14 82.4 40 92.5
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 2.6e-14 82.4 55 72.7
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 2.6e-14 82.4 55 72.7
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 2.6e-14 82.4 54 70.4
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 3.4e-14 82.0 46 76.1
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 1.0e-13 80.5 46 80.4
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.3e-13 80.1 40 90.0
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 1.3e-13 80.1 42 85.7
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 1.3e-13 80.1 47 80.9
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.3e-13 80.1 40 87.5
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.7e-13 79.7 40 85.0
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.7e-13 79.7 40 85.0
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.7e-13 79.7 40 85.0
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.7e-13 79.7 40 85.0
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 1.7e-13 79.7 40 85.0
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 2.2e-13 79.3 43 79.1
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 2.9e-13 79.0 43 81.4
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 2.9e-13 79.0 40 85.0
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.9e-13 79.0 40 85.0
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.9e-13 79.0 40 85.0
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.9e-13 79.0 40 85.0
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 3.8e-13 78.6 41 85.4
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 6.5e-13 77.8 39 84.6
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 6.5e-13 77.8 39 84.6
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 6.5e-13 77.8 39 84.6
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 8.5e-13 77.4 64 57.8
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 1.4e-12 76.6 54 61.1
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 1.4e-12 76.6 37 86.5
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 1.4e-12 76.6 40 85.0
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 1.4e-12 76.6 40 85.0
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 1.4e-12 76.6 39 84.6
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.9e-12 76.3 38 84.2
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.9e-12 76.3 42 78.6
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.9e-12 76.3 40 80.0
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.9e-12 76.3 43 76.7
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.9e-12 76.3 49 71.4
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 2.5e-12 75.9 55 65.5
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.5e-12 75.9 37 89.2
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 3.2e-12 75.5 48 70.8
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 4.2e-12 75.1 39 82.1
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 4.2e-12 75.1 40 77.5
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 4.2e-12 75.1 36 88.9
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 5.5e-12 74.7 39 82.1
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 5.5e-12 74.7 36 86.1
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 5.5e-12 74.7 36 86.1
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 5.5e-12 74.7 39 79.5
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 5.5e-12 74.7 53 66.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 5.5e-12 74.7 39 79.5
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 7.2e-12 74.3 39 79.5
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 7.2e-12 74.3 39 79.5
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 7.2e-12 74.3 39 79.5
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 7.2e-12 74.3 52 65.4
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 9.4e-12 73.9 37 86.5
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 9.4e-12 73.9 35 88.6
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 9.4e-12 73.9 40 80.0
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 9.4e-12 73.9 36 86.1
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 9.4e-12 73.9 34 91.2
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 9.4e-12 73.9 36 86.1
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 9.4e-12 73.9 36 86.1
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 1.2e-11 73.6 41 80.5
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.6e-11 73.2 38 78.9
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 2.1e-11 72.8 37 81.1
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 2.7e-11 72.4 53 66.0
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.6e-11 72.0 37 81.1
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 4.7e-11 71.6 39 82.1
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 6.1e-11 71.2 37 83.8
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 7.9e-11 70.9 39 82.1
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.3e-10 69.3 38 76.3
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 2.3e-10 69.3 39 76.9
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 3.0e-10 68.9 36 77.8
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 3.0e-10 68.9 35 80.0
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 8.8e-10 67.4 42 69.0
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 2.0e-09 66.2 36 75.0
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 9.7e-09 63.9 34 79.4
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 1.3e-08 63.5 37 75.7
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 3.7e-08 62.0 43 69.8
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 6.3e-08 61.2 43 62.8
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 8.2e-08 60.8 45 62.2
HanXRQChr05g0131681 Helianthus annuus HOM05D006246 ORTHO05D007932 8.2e-08 60.8 59 74.6
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 1.4e-07 60.1 46 63.0
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.4e-07 59.3 31 80.6


User provided reference genes

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