Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03051 Eucalyptus grandis HOM05D002237 ORTHO05D002213 2.2e-155 552.4 305 100.0
Manes.16G080900 Manihot esculenta HOM05D002237 ORTHO05D002213 3.2e-29 133.3 320 34.7
Eucgr.C00651 Eucalyptus grandis HOM05D002237 ORTHO05D002213 2.0e-26 124.0 348 32.8
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 2.2e-25 120.6 341 35.8
Gohir.A06G087500 Gossypium hirsutum HOM05D002237 ORTHO05D002213 8.2e-25 118.6 318 33.6
Gorai.010G100300 Gossypium raimondii HOM05D002237 ORTHO05D002213 8.2e-25 118.6 318 33.6
Sabra18G0048700 Salix brachista HOM05D002237 ORTHO05D002213 1.8e-24 117.5 322 34.8
Gohir.D06G086900 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.4e-24 117.1 318 33.3
Gohir.D07G022000 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.4e-24 117.1 319 34.2
Gorai.001G022700 Gossypium raimondii HOM05D002237 ORTHO05D002213 3.1e-24 116.7 320 34.4
Nn8g38853 Nelumbo nucifera HOM05D002237 ORTHO05D002213 4.1e-24 116.3 297 37.0
Gohir.A07G022100 Gossypium hirsutum HOM05D002237 ORTHO05D002213 2.6e-23 113.6 323 34.1
TWI34G0810 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 4.5e-23 112.8 308 32.8
TWI63G0889 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 1.3e-22 111.3 328 32.6
Duzib150G1021 Durio zibethinus HOM05D002237 ORTHO05D002213 2.9e-22 110.2 332 32.5
MD15G1059100 Malus domestica HOM05D002237 ORTHO05D002213 6.5e-22 109.0 314 32.5
MSTRG.14057 Avicennia marina HOM05D002237 ORTHO05D002213 5.5e-21 105.9 322 30.1
Cfa017959 Carpinus fangiana HOM05D002237 ORTHO05D002213 5.5e-21 105.9 301 38.9
CANSAT25G0876 Cannabis sativa HOM05D002237 ORTHO05D002213 9.4e-21 105.1 299 35.8
Sabra06G0177200 Salix brachista HOM05D002237 ORTHO05D002213 9.4e-21 105.1 323 29.1
Thecc.09G054200 Theobroma cacao HOM05D002237 ORTHO05D002213 9.4e-21 105.1 336 32.4
VMungo0647G2239 Vigna mungo HOM05D002237 ORTHO05D002213 1.6e-20 104.4 322 37.0
MSTRG.25948 Avicennia marina HOM05D002237 ORTHO05D002213 6.1e-20 102.4 302 29.8
Manes.16G101500 Manihot esculenta HOM05D002237 ORTHO05D002213 1.0e-19 101.7 305 33.1
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 1.0e-19 101.7 335 31.6
Prupe.1G411600 Prunus persica HOM05D002237 ORTHO05D002213 2.3e-19 100.5 309 34.0
QL02p001128 Quercus lobata HOM05D002237 ORTHO05D002213 2.3e-19 100.5 309 34.3
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 3.0e-19 100.1 291 35.4
FAN27G2230 Fragaria x ananassa HOM05D002237 ORTHO05D002213 4.0e-19 99.8 319 38.6
FAN20G2042 Fragaria x ananassa HOM05D002237 ORTHO05D002213 8.8e-19 98.6 319 39.2
Phvul.001G036100 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 8.8e-19 98.6 318 35.5
SalBow4G0805 Salvia bowleyana HOM05D002237 ORTHO05D002213 8.8e-19 98.6 322 30.4
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.2e-18 98.2 327 35.5
Potri.006G228800 Populus trichocarpa HOM05D002237 ORTHO05D002213 1.2e-18 98.2 324 32.1
SGA_v2.0_scaffold163G38027 Striga asiatica HOM05D002237 ORTHO05D002213 1.2e-18 98.2 326 32.5
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.5e-18 97.8 302 30.1
Dinv22895 Davidia involucrata HOM05D002237 ORTHO05D002213 1.5e-18 97.8 295 36.9
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 2.0e-18 97.4 322 34.2
Cpa.g.sc7.182 Carica papaya HOM05D002237 ORTHO05D002213 4.4e-18 96.3 354 30.5
DCAR_000797 Daucus carota HOM05D002237 ORTHO05D002213 4.4e-18 96.3 292 35.3
THA.LOC104803728 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 4.4e-18 96.3 315 31.1
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 9.7e-18 95.1 304 33.6
CiPaw.16G028400 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.3e-17 94.7 385 28.3
FAN15G1416 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.3e-17 94.7 312 39.1
THA.LOC104803792 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 1.7e-17 94.4 320 31.2
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.8e-17 93.6 295 29.8
CARHR114840 Cardamine hirsuta HOM05D002237 ORTHO05D002213 2.8e-17 93.6 309 30.1
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 2.8e-17 93.6 303 33.3
Potri.018G053000 Populus trichocarpa HOM05D002237 ORTHO05D002213 1.1e-16 91.7 328 30.2
Sopen08g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 1.1e-16 91.7 340 29.4
Haze_18179 Corylus avellana HOM05D002237 ORTHO05D002213 1.4e-16 91.3 312 33.7
Oeu059606.1 Olea europaea HOM05D002237 ORTHO05D002213 1.4e-16 91.3 305 30.5
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 1.4e-16 91.3 318 30.8
AT2G26110 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 2.4e-16 90.5 312 30.8
RcHm_v2.0_Chr6g0310991 Rosa chinensis HOM05D002237 ORTHO05D002213 2.4e-16 90.5 302 35.8
CSS0012916 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 5.3e-16 89.4 304 32.2
Haze_18186 Corylus avellana HOM05D002237 ORTHO05D002213 5.3e-16 89.4 315 34.6
SGA_v2.0_scaffold169G38695 Striga asiatica HOM05D002237 ORTHO05D002213 5.3e-16 89.4 309 36.6
Lsat_1_v5_gn_6_13421 Lactuca sativa HOM05D002237 ORTHO05D002213 9.1e-16 88.6 345 29.6
Solyc08g065150.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 9.1e-16 88.6 336 30.4
MSTRG.1684 Avicennia marina HOM05D002237 ORTHO05D002213 1.6e-15 87.8 326 29.1
AL4G18280 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 2.0e-15 87.4 310 30.0
Aa31LG5G9660 Aethionema arabicum HOM05D002237 ORTHO05D002213 2.7e-15 87.0 323 29.7
Thhalv10002336m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 3.5e-15 86.7 307 30.0
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 4.5e-15 86.3 309 33.3
MD08G1062500 Malus domestica HOM05D002237 ORTHO05D002213 2.9e-14 83.6 300 28.7
Nn6g35487 Nelumbo nucifera HOM05D002237 ORTHO05D002213 2.9e-14 83.6 293 30.0
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 2.9e-14 83.6 294 27.6
TPR.G13085 Trifolium pratense HOM05D002237 ORTHO05D002213 2.9e-14 83.6 317 35.6
CAN.G352.21 Capsicum annuum HOM05D002237 ORTHO05D002213 3.8e-14 83.2 337 27.3
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 3.8e-14 83.2 294 27.6
PGSC0003DMG400035559 Solanum tuberosum HOM05D002237 ORTHO05D002213 3.8e-14 83.2 361 29.9
HanXRQChr03g0079531 Helianthus annuus HOM05D002237 ORTHO05D002213 5.0e-14 82.8 344 29.9
Sp4g05990 Schrenkiella parvula HOM05D002237 ORTHO05D002213 5.0e-14 82.8 293 31.1
TAR383G0406 Trochodendron aralioides HOM05D002237 ORTHO05D002213 5.0e-14 82.8 298 29.9
Nitab4.5_0001367g0050 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.9e-13 80.9 347 33.1
Medtr1g016100 Medicago truncatula HOM05D002237 ORTHO05D002213 2.5e-13 80.5 325 32.3
PSO210G0663 Papaver somniferum HOM05D002237 ORTHO05D002213 2.5e-13 80.5 294 26.5
Cc08_g10640 Coffea canephora HOM05D002237 ORTHO05D002213 5.5e-13 79.3 363 30.9
Manes.03G034300 Manihot esculenta HOM05D002237 ORTHO05D002213 5.5e-13 79.3 306 33.3
DCAR_004423 Daucus carota HOM05D002237 ORTHO05D002213 7.2e-13 79.0 301 28.2
BolC9t57710H Brassica oleracea HOM05D002237 ORTHO05D002213 1.2e-12 78.2 319 29.8
Aqoxy7G01205 Aquilegia oxysepala HOM05D002237 ORTHO05D002213 1.6e-12 77.8 297 28.6
Cc03_g09990 Coffea canephora HOM05D002237 ORTHO05D002213 1.6e-12 77.8 108 39.8
Glyma.14G095300 Glycine max HOM05D002237 ORTHO05D002213 3.6e-12 76.6 333 34.8
Carub.0004s0595 Capsella rubella HOM05D002237 ORTHO05D002213 4.7e-12 76.3 319 30.4
Eucgr.C00891 Eucalyptus grandis HOM05D002237 ORTHO05D002213 4.7e-12 76.3 299 27.8
Ciclev10009087m.g Citrus clementina HOM05D002237 ORTHO05D002213 6.1e-12 75.9 316 30.4
MELO3C016871.2 Cucumis melo HOM05D002237 ORTHO05D002213 8.0e-12 75.5 386 29.5
Ca_13160_v3 Cicer arietinum L. HOM05D002237 ORTHO05D002213 1.0e-11 75.1 324 32.4
unitig_748.g7525 Utricularia gibba HOM05D002237 ORTHO05D002213 1.8e-11 74.3 301 29.6
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 2.3e-11 73.9 292 34.9
Lalb_Chr22g0356091 Lupinus albus HOM05D002237 ORTHO05D002213 4.0e-11 73.2 310 29.0
Peaxi162Scf01444g00003 Petunia axillaris HOM05D002237 ORTHO05D002213 6.8e-11 72.4 337 30.3
CiPaw.15G038600 Carya illinoinensis HOM05D002237 ORTHO05D002213 8.8e-11 72.0 283 35.3
Lsat_1_v5_gn_5_47580 Lactuca sativa HOM05D002237 ORTHO05D002213 1.5e-10 71.2 327 25.7
Nitab4.5_0003939g0020 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.5e-10 71.2 80 51.2
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 2.6e-10 70.5 283 31.4
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 3.4e-10 70.1 80 51.2
Thhalv10025915m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 4.4e-10 69.7 299 32.8
Cc11_g08620 Coffea canephora HOM05D002237 ORTHO05D002213 5.7e-10 69.3 111 37.8
ECA233G4745 Erigeron canadensis HOM05D002237 ORTHO05D002213 5.7e-10 69.3 337 26.1
vmacro00140 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 5.7e-10 69.3 80 48.8
THA.LOC104817760 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 9.8e-10 68.6 317 26.8
Eucgr.C00886 Eucalyptus grandis HOM05D002237 ORTHO05D002213 1.3e-09 68.2 366 27.0
HanXRQChr07g0192621 Helianthus annuus HOM05D002237 ORTHO05D002213 1.7e-09 67.8 353 33.1
CsaV3_4G035640 Cucumis sativus L. HOM05D002237 ORTHO05D002213 2.2e-09 67.4 385 28.6
MBI01_g16600_MAGBIO Magnolia biondii HOM05D000250 ORTHO05D000625 2.2e-09 67.4 291 30.2
CsaV3_1G040530 Cucumis sativus L. HOM05D002237 ORTHO05D002213 2.8e-09 67.0 294 31.0
BcaNung05239 Brassica carinata HOM05D002237 ORTHO05D002213 3.7e-09 66.6 313 28.8
ClCG05G017870 Citrullus lanatus HOM05D002237 ORTHO05D002213 3.7e-09 66.6 388 27.3
Migut.A00134 Erythranthe guttata HOM05D002237 ORTHO05D002213 3.7e-09 66.6 312 28.2
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 3.7e-09 66.6 107 46.7
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 3.7e-09 66.6 107 46.7
unitig_32.g11468 Utricularia gibba HOM05D002237 ORTHO05D002213 3.7e-09 66.6 290 27.6
Sp7g24150 Schrenkiella parvula HOM05D002237 ORTHO05D002213 4.8e-09 66.2 295 33.2
Glyma.13G104500 Glycine max HOM05D002237 ORTHO05D002213 8.3e-09 65.5 308 33.8
Hma1.2p1_0798F.1_g219880 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 2.4e-08 63.9 84 41.7
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 2.4e-08 63.9 309 24.9
MBI04_g31173_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 2.4e-08 63.9 312 23.7
Oeu041231.1 Olea europaea HOM05D002237 ORTHO05D002213 2.4e-08 63.9 107 44.9
Carub.0008s1746 Capsella rubella HOM05D002237 ORTHO05D002213 3.1e-08 63.5 381 24.1
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 3.1e-08 63.5 292 26.4
Oeu036333.1 Olea europaea HOM05D002237 ORTHO05D002213 5.4e-08 62.8 304 25.0
PGR044G2218 Punica granatum HOM05D002237 ORTHO05D002213 5.4e-08 62.8 133 40.6
Sc09g0009840 Simmondsia chinensis HOM05D002237 ORTHO05D002213 7.0e-08 62.4 288 27.1
ClCG03G015520 Citrullus lanatus HOM05D002237 ORTHO05D002213 9.1e-08 62.0 297 27.9
MELO3C015480.2 Cucumis melo HOM05D002237 ORTHO05D002213 9.1e-08 62.0 293 29.0
Actinidia39714 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.2e-07 61.6 291 30.9
PSO063G0636 Papaver somniferum HOM05D002237 ORTHO05D002213 1.2e-07 61.6 118 34.7
Sed0018033 Sechium edule HOM05D002237 ORTHO05D002213 1.2e-07 61.6 379 30.6
Actinidia39713 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.6e-07 61.2 293 30.0
BcaC03g14188 Brassica carinata HOM05D002237 ORTHO05D002213 1.6e-07 61.2 372 24.2
C02p14710 Brassica napus HOM05D002237 ORTHO05D002213 1.6e-07 61.2 372 24.2
BolC2t07596H Brassica oleracea HOM05D002237 ORTHO05D002213 1.6e-07 61.2 372 24.2
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 1.6e-07 61.2 77 45.5
BraA02t05949Z Brassica rapa HOM05D002237 ORTHO05D002213 2.7e-07 60.5 374 24.3
THA.LOC104811745 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 2.7e-07 60.5 319 28.8
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 3.5e-07 60.1 286 27.6
BcaB05g22304 Brassica carinata HOM05D002237 ORTHO05D002213 3.5e-07 60.1 368 29.1
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 3.5e-07 60.1 286 29.4
PGR142G4283 Punica granatum HOM05D002237 ORTHO05D002213 3.5e-07 60.1 348 29.9
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 3.5e-07 60.1 298 33.6
TWI63G0843 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 3.5e-07 60.1 307 30.9
HanXRQChr06g0178571 Helianthus annuus HOM05D002237 ORTHO05D002213 4.5e-07 59.7 310 27.4
Lj7P270T5 Lonicera japonica HOM05D002237 ORTHO05D002213 4.5e-07 59.7 259 32.0
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 7.7e-07 58.9 290 29.0
Phvul.003G136600 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 7.7e-07 58.9 306 34.3
Psat4g015760 Pisum sativum HOM05D002237 ORTHO05D002213 7.7e-07 58.9 73 47.9
Sed0011201 Sechium edule HOM05D002237 ORTHO05D002213 7.7e-07 58.9 298 32.2
A02p08820 Brassica napus HOM05D002237 ORTHO05D002213 1.0e-06 58.5 364 28.6
CARHR233650 Cardamine hirsuta HOM05D002237 ORTHO05D002213 1.0e-06 58.5 306 26.1
Lalb_Chr14g0366301 Lupinus albus HOM05D002237 ORTHO05D002213 1.0e-06 58.5 82 47.6
Sp6g18690 Schrenkiella parvula HOM05D002237 ORTHO05D002213 1.0e-06 58.5 371 26.7
BraA01t01695Z Brassica rapa HOM05D002237 ORTHO05D002213 1.3e-06 58.2 313 31.6
Lj5g0000472 Lotus japonicus HOM05D002237 ORTHO05D002213 1.3e-06 58.2 316 32.3
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 1.3e-06 58.2 287 27.9
A01p17410 Brassica napus HOM05D002237 ORTHO05D002213 1.7e-06 57.8 296 32.1
Cpa.g.sc61.39 Carica papaya HOM05D002237 ORTHO05D002213 1.7e-06 57.8 99 40.4
Psat6g020080 Pisum sativum HOM05D002237 ORTHO05D002213 1.7e-06 57.8 293 31.4
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 2.3e-06 57.4 77 44.2
Aa31LG3G12870 Aethionema arabicum HOM05D002237 ORTHO05D002213 2.9e-06 57.0 355 25.9
ECA236G2512 Erigeron canadensis HOM05D002237 ORTHO05D002213 2.9e-06 57.0 307 28.7
Thhalv10013847m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 2.9e-06 57.0 372 24.2
SalBow6G1974 Salvia bowleyana HOM05D002237 ORTHO05D002213 2.9e-06 57.0 304 33.2
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 2.9e-06 57.0 328 27.1
Prupe.7G209100 Prunus persica HOM05D002237 ORTHO05D002213 3.8e-06 56.6 296 30.4
A09p47750 Brassica napus HOM05D002237 ORTHO05D002213 5.0e-06 56.2 302 27.2
Sabra06G0120500 Salix brachista HOM05D002237 ORTHO05D002213 6.5e-06 55.8 307 31.3
VMungo1309G0962 Vigna mungo HOM05D002237 ORTHO05D002213 8.6e-06 55.5 301 25.2


User provided reference genes

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