Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 2.7e-89 332.4 228 100.0
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 3.0e-48 196.1 232 69.0
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.1e-42 177.6 231 65.4
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.9e-42 176.8 229 63.8
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.5e-42 176.4 232 65.9
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 3.2e-42 176.0 230 63.9
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 5.5e-42 175.3 227 64.3
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 5.5e-42 175.3 231 64.1
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 7.2e-42 174.9 237 62.4
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 1.2e-41 174.1 154 79.2
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.2e-41 174.1 232 66.4
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.7e-41 172.9 230 63.0
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 2.7e-41 172.9 230 63.0
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 2.7e-41 172.9 230 63.0
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 3.6e-41 172.6 228 60.1
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 6.1e-41 171.8 229 60.7
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 1.0e-40 171.0 229 63.3
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.8e-40 170.2 229 63.8
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 2.3e-40 169.9 228 64.5
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 3.0e-40 169.5 228 61.4
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 6.8e-40 168.3 230 61.7
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.5e-39 167.2 157 79.0
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 2.0e-39 166.8 228 62.7
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 9.8e-39 164.5 231 58.0
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 9.8e-39 164.5 227 63.0
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 1.3e-38 164.1 227 63.4
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 1.7e-38 163.7 221 60.6
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 2.8e-38 162.9 154 74.0
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.8e-38 162.9 233 59.7
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 3.7e-38 162.5 204 68.1
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 3.7e-38 162.5 230 59.6
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 8.3e-38 161.4 232 60.8
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 1.1e-37 161.0 225 63.1
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 1.4e-37 160.6 229 60.3
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.8e-37 160.2 232 63.4
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 1.8e-37 160.2 226 62.8
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 1.8e-37 160.2 227 62.1
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 5.4e-37 158.7 213 60.1
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 7.0e-37 158.3 226 59.7
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 9.1e-37 157.9 222 61.7
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 9.1e-37 157.9 231 59.3
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 9.1e-37 157.9 226 62.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.2e-36 157.5 228 63.6
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.2e-36 157.5 226 62.4
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 2.0e-36 156.8 230 61.7
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 2.7e-36 156.4 230 63.0
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 3.5e-36 156.0 229 55.5
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 7.7e-36 154.8 229 55.5
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 1.0e-35 154.5 228 56.1
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.0e-35 154.5 231 58.0
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 1.3e-35 154.1 229 56.8
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.9e-35 152.9 144 60.4
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.8e-35 152.5 179 58.1
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.8e-35 152.5 226 59.7
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 5.0e-35 152.1 230 56.1
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.5e-34 150.6 228 57.9
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 3.3e-34 149.4 230 58.3
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 5.5e-34 148.7 226 61.5
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 1.2e-33 147.5 154 68.8
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 1.6e-33 147.1 231 59.3
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 1.6e-33 147.1 235 57.0
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 2.8e-33 146.4 232 55.2
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 3.6e-33 146.0 233 59.7
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 3.6e-33 146.0 228 54.4
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 4.7e-33 145.6 229 48.0
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 6.1e-33 145.2 226 58.4
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 6.1e-33 145.2 227 58.6
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 8.0e-33 144.8 233 56.2
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 1.4e-32 144.1 174 57.5
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 2.3e-32 143.3 225 58.2
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 2.3e-32 143.3 232 57.3
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 4.0e-32 142.5 231 59.3
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 4.0e-32 142.5 223 58.7
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 5.2e-32 142.1 142 76.1
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 5.2e-32 142.1 225 52.9
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 8.9e-32 141.4 222 57.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.5e-31 140.6 222 55.0
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 2.6e-31 139.8 229 58.5
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 2.6e-31 139.8 179 55.3
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 3.4e-31 139.4 227 55.9
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 7.5e-31 138.3 225 56.9
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 7.5e-31 138.3 228 59.6
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.3e-30 137.5 127 73.2
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 7.0e-29 131.7 164 56.7
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.6e-28 130.6 229 52.4
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 1.6e-28 130.6 154 66.2
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.0e-27 127.9 227 55.9
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 1.0e-27 127.9 106 68.9
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.9e-26 123.6 124 78.2
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 3.3e-26 122.9 235 53.2
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 7.5e-23 111.7 157 56.1
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 1.7e-22 110.5 153 51.6
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 3.7e-22 109.4 106 82.1
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 3.7e-22 109.4 106 73.6
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 4.9e-22 109.0 108 80.6
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 6.4e-22 108.6 74 78.4
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.0e-19 101.3 152 50.7
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 3.9e-19 99.4 105 58.1
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.1e-18 97.8 106 80.2
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.5e-18 97.4 97 55.7
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 1.9e-18 97.1 85 57.6
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.5e-18 96.7 97 55.7
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 3.3e-18 96.3 97 54.6
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 2.1e-17 93.6 150 57.3
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.4e-16 90.9 145 43.4
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 2.2e-14 83.6 195 30.8
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 2.9e-14 83.2 85 47.1
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 3.2e-13 79.7 60 68.3
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 2.1e-12 77.0 84 53.6
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 2.8e-09 66.6 81 50.6
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 6.2e-09 65.5 105 46.7
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.4e-08 64.3 101 47.5
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 2.2e-06 57.0 40 82.5
ATR0071G034 Amborella trichopoda HOM05D007100 ORTHO05D008958 6.4e-06 55.5 99 44.4
AUR62044181 Chenopodium quinoa HOM05D026575 ORTHO05D028765 6.4e-06 55.5 40 80.0


User provided reference genes

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