Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 5.7e-104 380.9 194 100.0
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 6.9e-102 374.0 194 97.9
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 6.5e-68 261.2 197 70.6
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.0e-65 252.3 198 69.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.5e-64 250.0 174 75.9
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 9.8e-64 247.3 173 78.0
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 9.8e-64 247.3 173 78.0
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.7e-63 246.5 198 69.2
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 2.8e-63 245.7 171 77.2
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 8.3e-63 244.2 198 70.7
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 2.4e-62 242.7 196 70.9
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.4e-62 242.7 182 72.5
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 5.4e-62 241.5 175 76.6
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 7.0e-62 241.1 173 74.6
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 9.1e-62 240.7 190 70.0
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 9.1e-62 240.7 178 73.6
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.2e-61 240.4 192 69.3
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.7e-61 239.2 173 74.0
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.7e-61 239.2 173 74.0
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.5e-61 238.8 195 70.8
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.5e-61 238.4 173 74.0
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 7.7e-61 237.7 197 68.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.0e-60 237.3 195 70.3
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-60 236.9 198 67.7
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 2.2e-60 236.1 192 68.2
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.9e-60 235.7 175 75.4
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.9e-60 235.7 195 67.7
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 3.8e-60 235.3 195 70.3
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 3.8e-60 235.3 174 73.0
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 5.0e-60 235.0 186 70.4
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 6.5e-60 234.6 174 73.0
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-59 233.8 173 75.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.9e-59 233.0 174 71.8
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-59 233.0 174 74.1
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 5.5e-59 231.5 174 72.4
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 7.2e-59 231.1 178 71.3
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 9.4e-59 230.7 149 81.9
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 9.4e-59 230.7 200 66.5
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 2.1e-58 229.6 197 66.5
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 2.1e-58 229.6 198 68.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.1e-58 229.6 168 72.6
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 3.6e-58 228.8 201 65.2
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 4.7e-58 228.4 170 72.9
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.1e-58 228.0 176 71.0
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 8.0e-58 227.6 195 67.2
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 8.0e-58 227.6 187 66.8
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 8.0e-58 227.6 173 72.3
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.0e-57 227.3 138 85.5
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.4e-57 226.9 177 67.8
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 2.3e-57 226.1 195 67.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.0e-57 225.7 194 67.0
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 4.0e-57 225.3 196 65.3
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 4.0e-57 225.3 179 69.8
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 6.8e-57 224.6 166 72.9
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 6.8e-57 224.6 153 75.2
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 8.8e-57 224.2 152 75.7
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 8.8e-57 224.2 164 70.7
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 8.8e-57 224.2 157 77.1
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 8.8e-57 224.2 175 70.3
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.2e-56 223.8 149 75.8
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 1.2e-56 223.8 194 67.5
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.2e-56 223.8 178 68.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.5e-56 223.4 198 63.6
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.6e-56 222.6 180 70.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.4e-56 222.2 180 66.1
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 4.4e-56 221.9 192 66.7
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.7e-56 221.5 171 71.3
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 5.7e-56 221.5 164 72.6
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 7.5e-56 221.1 150 76.0
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 7.5e-56 221.1 196 65.3
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 7.5e-56 221.1 179 69.3
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 9.8e-56 220.7 178 68.0
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 9.8e-56 220.7 162 72.8
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 9.8e-56 220.7 130 86.9
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.3e-55 220.3 195 66.7
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.3e-55 220.3 150 76.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.3e-55 220.3 178 67.4
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.7e-55 219.9 155 74.2
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.7e-55 219.9 171 71.9
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.7e-55 219.9 136 81.6
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.7e-55 219.9 178 67.4
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.2e-55 219.5 149 74.5
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.2e-55 219.5 130 86.2
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 2.2e-55 219.5 133 86.5
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.8e-55 219.2 155 74.8
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 3.7e-55 218.8 199 63.8
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.9e-55 218.4 130 86.2
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.9e-55 218.4 173 67.6
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 6.3e-55 218.0 197 62.9
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 6.3e-55 218.0 174 67.2
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.1e-54 217.2 179 67.0
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.1e-54 217.2 182 68.1
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.4e-54 216.9 159 71.7
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.4e-54 216.9 192 63.5
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 2.4e-54 216.1 193 66.3
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.1e-54 215.7 154 75.3
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.1e-54 215.3 182 67.6
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 4.1e-54 215.3 188 63.8
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 7.0e-54 214.5 175 66.9
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 7.0e-54 214.5 178 67.4
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.0e-53 213.0 151 75.5
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.7e-53 212.6 203 62.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 3.5e-53 212.2 155 72.3
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.5e-53 212.2 198 61.6
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 7.7e-53 211.1 195 62.6
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 170 67.6
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.3e-52 210.3 186 64.0
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-52 209.9 155 71.0
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.7e-52 209.9 170 67.1
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.3e-52 209.5 137 79.6
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.9e-52 209.1 162 72.2
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 2.9e-52 209.1 166 68.1
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.9e-52 209.1 162 72.2
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 3.8e-52 208.8 138 80.4
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 3.8e-52 208.8 140 79.3
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 3.8e-52 208.8 140 79.3
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 3.8e-52 208.8 155 71.6
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.8e-52 208.8 174 66.7
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.5e-51 206.8 137 77.4
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 2.5e-51 206.1 195 62.1
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.6e-50 202.2 172 68.6
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.0e-49 200.7 176 64.8
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.6e-48 196.1 114 89.5
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 7.5e-48 194.5 114 87.7
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 7.5e-48 194.5 114 87.7
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 7.5e-48 194.5 133 72.9
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.3e-47 193.7 115 86.1
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-47 193.7 136 75.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.3e-47 193.7 134 78.4
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 3.7e-47 192.2 113 88.5
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 2.4e-46 189.5 112 84.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.4e-46 189.5 152 67.1
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 3.2e-46 189.1 174 63.8
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 9.2e-46 187.6 178 60.1
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 1.6e-45 186.8 199 57.8
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.6e-45 186.8 112 84.8
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 2.3e-44 183.0 174 63.2
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.9e-44 182.2 176 61.4
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.6e-44 181.4 137 70.1
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 8.6e-44 181.0 186 57.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 8.6e-44 181.0 176 60.8
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.1e-43 180.6 108 83.3
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 7.3e-43 177.9 108 87.0
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.2e-42 177.2 130 73.8
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 8.0e-42 174.5 150 66.7
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 8.0e-42 174.5 154 66.9
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.8e-41 173.3 139 66.2
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 3.1e-41 172.6 192 53.6
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 9.8e-40 167.5 140 67.1
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.9e-38 163.3 198 54.0
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.2e-37 160.6 114 71.9
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 2.0e-37 159.8 111 72.1
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 3.3e-35 152.5 114 69.3
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.6e-34 150.2 290 37.2
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 2.1e-29 133.3 111 60.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.3e-28 130.6 139 59.0
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.3e-28 130.6 109 67.9
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.8e-25 120.2 131 51.1
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 4.0e-25 119.0 90 71.1
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.0e-20 104.4 91 62.6
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 2.3e-20 103.2 91 61.5
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 8.6e-20 101.3 86 62.8
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 3.3e-19 99.4 87 64.4
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.1e-18 96.7 87 63.2
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.1e-18 96.7 87 63.2
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 7.6e-16 88.2 86 57.0
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 9.3e-14 81.3 44 95.5
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 7.8e-13 78.2 63 63.5
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.3e-12 77.4 49 79.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.7e-07 60.5 58 58.6


User provided reference genes

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