Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.6e-121 439.5 230 100.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.2e-115 419.1 228 97.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.2e-83 312.8 219 74.0
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.6e-81 306.6 229 72.5
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 2.7e-81 305.8 189 84.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.8e-80 303.1 222 74.8
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.3e-80 302.8 216 74.5
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 4.0e-80 302.0 227 70.9
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.0e-80 302.0 228 71.1
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 6.7e-80 301.2 227 74.0
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 8.8e-80 300.8 192 80.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 8.8e-80 300.8 222 73.9
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.5e-79 300.1 229 71.6
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.0e-79 299.7 189 83.1
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.4e-79 298.5 214 73.8
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 4.4e-79 298.5 229 71.2
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 4.4e-79 298.5 230 68.7
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 5.7e-79 298.1 188 82.4
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 9.7e-79 297.4 187 80.7
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.3e-78 297.0 214 74.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.2e-78 296.2 188 81.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.7e-78 295.4 187 82.4
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 3.7e-78 295.4 190 78.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 4.8e-78 295.0 199 78.9
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.3e-78 294.7 200 76.0
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 6.3e-78 294.7 202 76.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 6.3e-78 294.7 188 79.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 8.2e-78 294.3 229 68.1
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.8e-77 293.1 228 68.9
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.1e-77 292.0 229 70.7
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 4.1e-77 292.0 229 69.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 5.3e-77 291.6 213 74.6
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 9.1e-77 290.8 228 70.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 9.1e-77 290.8 190 76.8
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.2e-76 290.4 228 68.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.2e-76 290.4 213 70.0
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 1.6e-76 290.0 198 78.3
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.0e-76 289.7 187 81.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 2.0e-76 289.7 187 81.3
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 2.7e-76 289.3 225 69.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.5e-76 288.9 184 78.8
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 3.5e-76 288.9 219 70.3
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 4.5e-76 288.5 202 74.3
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 4.5e-76 288.5 189 76.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 4.5e-76 288.5 189 76.7
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 5.9e-76 288.1 210 70.0
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 5.9e-76 288.1 228 67.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.0e-75 287.3 190 76.8
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.0e-75 287.3 228 70.2
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.3e-75 287.0 217 70.0
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.2e-75 286.2 213 72.3
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.2e-75 286.2 213 71.8
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.9e-75 285.8 213 70.4
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.9e-75 285.8 191 77.5
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.9e-75 285.8 187 79.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 3.8e-75 285.4 188 79.3
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.5e-74 283.5 213 71.4
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.9e-74 283.1 188 77.7
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.9e-74 283.1 178 83.1
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 2.5e-74 282.7 187 78.6
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 3.2e-74 282.3 188 78.2
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 3.2e-74 282.3 188 78.2
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 3.2e-74 282.3 205 72.2
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 3.2e-74 282.3 203 73.4
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 4.2e-74 282.0 188 78.7
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.5e-74 281.6 188 78.2
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 7.2e-74 281.2 188 77.7
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 9.4e-74 280.8 223 68.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 9.4e-74 280.8 218 70.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.2e-73 280.4 213 69.5
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.2e-73 280.4 190 76.8
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 3.6e-73 278.9 188 77.7
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 8.0e-73 277.7 216 69.0
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.0e-72 277.3 214 70.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.8e-72 276.6 212 67.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.0e-72 275.4 212 69.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 5.2e-72 275.0 189 77.2
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 8.8e-72 274.2 222 67.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.5e-71 273.5 243 63.8
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 2.0e-71 273.1 214 67.8
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.7e-70 270.0 178 81.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-70 270.0 178 78.1
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-70 270.0 187 75.4
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.2e-70 269.6 183 76.0
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.4e-69 266.9 185 75.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.4e-69 266.9 184 72.3
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 4.1e-69 265.4 190 74.2
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.2e-68 263.8 255 60.0
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.6e-68 263.5 178 73.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.5e-68 262.3 166 81.9
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 7.7e-68 261.2 203 67.5
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.3e-67 259.6 187 73.3
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.9e-67 259.2 165 79.4
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.9e-67 259.2 217 65.9
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.0e-64 250.8 228 62.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.4e-61 239.6 157 77.7
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.6e-59 231.5 179 69.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 3.6e-57 225.7 160 68.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.7e-54 216.9 189 57.1
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.9e-54 216.1 221 52.9
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.9e-51 205.7 241 51.9
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 5.2e-48 195.3 177 53.1
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 2.0e-47 193.4 145 64.1
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.9e-46 188.7 206 47.6
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.0e-43 181.0 217 48.4
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.7e-41 172.2 175 50.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.3e-40 169.9 173 50.9
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.2e-38 163.3 181 46.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-37 161.0 102 80.4
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.4e-37 158.7 177 49.7
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.1e-29 134.4 169 45.0
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.1e-29 134.4 173 42.2
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.1e-17 93.6 57 82.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.1e-16 91.3 179 35.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.9e-10 70.5 54 68.5
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.8e-09 66.6 88 52.3
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 2.9e-06 56.6 69 50.7


User provided reference genes

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