Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02406_v3 Cicer arietinum L. HOM05D000361 ORTHO05D030746 7.6e-89 330.5 169 100.0
VMungo1309G2334 Vigna mungo HOM05D000361 ORTHO05D008294 5.8e-28 128.3 140 55.0
TPR.G6256 Trifolium pratense HOM05D000361 ORTHO05D008294 2.9e-27 125.9 140 54.3
Cpa.g.sc30.68 Carica papaya HOM05D000361 ORTHO05D008294 3.7e-27 125.6 140 51.4
Ca_17753_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008294 3.7e-27 125.6 140 54.3
Medtr8g090000 Medicago truncatula HOM05D000361 ORTHO05D008294 6.4e-27 124.8 140 54.3
ClCG01G025960 Citrullus lanatus HOM05D000361 ORTHO05D008294 8.3e-27 124.4 156 48.7
Phvul.009G245600 Phaseolus vulgaris HOM05D000361 ORTHO05D008294 1.9e-26 123.2 140 52.9
CANSAT35G1399 Cannabis sativa HOM05D000361 ORTHO05D008294 2.4e-26 122.9 141 53.9
CsaV3_6G053180 Cucumis sativus L. HOM05D000361 ORTHO05D008294 2.4e-26 122.9 140 51.4
Thecc.02G000800 Theobroma cacao HOM05D000361 ORTHO05D008294 2.4e-26 122.9 140 51.4
arahy.Tifrunner.gnm1.ann1.QR0DXW Arachis hypogaea HOM05D000361 ORTHO05D008294 3.2e-26 122.5 140 52.9
Lalb_Chr18g0051851 Lupinus albus HOM05D000361 ORTHO05D008294 3.2e-26 122.5 140 52.9
CiPaw.09G140700 Carya illinoinensis HOM05D000361 ORTHO05D008294 4.1e-26 122.1 141 53.2
Manes.16G060200 Manihot esculenta HOM05D000361 ORTHO05D008294 4.1e-26 122.1 141 52.5
arahy.Tifrunner.gnm1.ann1.76Y6MV Arachis hypogaea HOM05D000361 ORTHO05D008294 5.4e-26 121.7 140 52.1
Medtr2g437540 Medicago truncatula HOM05D000361 ORTHO05D008294 7.0e-26 121.3 140 52.1
Nn1g09868 Nelumbo nucifera HOM05D000361 ORTHO05D008294 9.2e-26 120.9 141 52.5
EL10Ac7g17302 Beta vulgaris HOM05D000361 ORTHO05D008294 1.2e-25 120.6 141 53.2
Sc24g0002810 Simmondsia chinensis HOM05D000361 ORTHO05D008294 1.2e-25 120.6 141 52.5
CSS0044464 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008294 1.6e-25 120.2 141 53.2
Psat7g056760 Pisum sativum HOM05D000361 ORTHO05D008294 1.6e-25 120.2 140 52.9
Duzib132G1205 Durio zibethinus HOM05D000361 ORTHO05D008294 2.0e-25 119.8 140 50.7
Gohir.A03G218100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 2.0e-25 119.8 140 50.7
Lj6g0011881 Lotus japonicus HOM05D000361 ORTHO05D008294 2.0e-25 119.8 140 51.4
TWI63G1117 Tripterygium wilfordii HOM05D000361 ORTHO05D008294 2.7e-25 119.4 141 50.4
Hund20134 Selenicereus undatus HOM05D000361 ORTHO05D008294 3.5e-25 119.0 141 51.8
Eucgr.D00002 Eucalyptus grandis HOM05D000361 ORTHO05D008294 4.6e-25 118.6 141 50.4
Glyma.09G047300 Glycine max HOM05D000361 ORTHO05D008294 4.6e-25 118.6 140 50.0
Glyma.15G154900 Glycine max HOM05D000361 ORTHO05D008294 4.6e-25 118.6 140 50.7
Gohir.D02G240100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 4.6e-25 118.6 138 51.4
Gorai.005G268500 Gossypium raimondii HOM05D000361 ORTHO05D008294 4.6e-25 118.6 138 51.4
QL11p010760 Quercus lobata HOM05D000361 ORTHO05D008294 4.6e-25 118.6 141 51.8
AUR62040986 Chenopodium quinoa HOM05D000361 ORTHO05D008294 6.0e-25 118.2 141 51.1
AUR62042103 Chenopodium quinoa HOM05D000361 ORTHO05D008294 6.0e-25 118.2 141 51.1
Peaxi162Scf00036g00321 Petunia axillaris HOM05D000361 ORTHO05D008294 6.0e-25 118.2 141 51.8
Sabra01G0052300 Salix brachista HOM05D000361 ORTHO05D008294 6.0e-25 118.2 141 50.4
MSTRG.13294 Avicennia marina HOM05D000361 ORTHO05D008294 1.0e-24 117.5 140 50.0
Haze_05186 Corylus avellana HOM05D000361 ORTHO05D008294 1.0e-24 117.5 141 49.6
Dinv07937 Davidia involucrata HOM05D000361 ORTHO05D008294 1.0e-24 117.5 141 51.1
Dinv18416 Davidia involucrata HOM05D000361 ORTHO05D008294 1.0e-24 117.5 141 51.1
Sed0009371 Sechium edule HOM05D000361 ORTHO05D008294 1.0e-24 117.5 140 51.4
SGA_v2.0_scaffold341G49368 Striga asiatica HOM05D000361 ORTHO05D008294 1.0e-24 117.5 140 50.0
Ah.15g091830 Amaranthus hybridus HOM05D000361 ORTHO05D008294 1.3e-24 117.1 141 51.8
Rhsim13G0136200 Rhododendron simsii HOM05D000361 ORTHO05D008294 1.3e-24 117.1 141 51.8
RcHm_v2.0_Chr5g0022071 Rosa chinensis HOM05D000361 ORTHO05D008294 1.3e-24 117.1 141 50.4
vmacro03573 Vaccinium macrocarpon HOM05D000361 ORTHO05D008294 1.3e-24 117.1 141 51.1
Cfa001165 Carpinus fangiana HOM05D000361 ORTHO05D008294 1.7e-24 116.7 141 49.6
FvH4_3g13360 Fragaria vesca HOM05D000361 ORTHO05D008294 1.7e-24 116.7 141 50.4
FAN11G3268 Fragaria x ananassa HOM05D000361 ORTHO05D008294 1.7e-24 116.7 141 50.4
FAN16G0385 Fragaria x ananassa HOM05D000361 ORTHO05D008294 1.7e-24 116.7 141 50.4
Migut.H01418 Erythranthe guttata HOM05D000361 ORTHO05D008294 2.3e-24 116.3 140 49.3
Nitab4.5_0007687g0010 Nicotiana tabacum HOM05D000361 ORTHO05D008294 2.3e-24 116.3 141 50.4
Potri.001G074000 Populus trichocarpa HOM05D000361 ORTHO05D008294 2.3e-24 116.3 141 50.4
Cc09_g04600 Coffea canephora HOM05D000361 ORTHO05D008294 3.9e-24 115.5 140 50.0
Nitab4.5_0001815g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008294 3.9e-24 115.5 141 48.9
AL8G14990 Arabidopsis lyrata HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
AT5G44635 Arabidopsis thaliana HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
BcaC06g31601 Brassica carinata HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
A06p47040 Brassica napus HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
BraA06t27577Z Brassica rapa HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
Sp2g09450 Schrenkiella parvula HOM05D000361 ORTHO05D008294 5.0e-24 115.2 141 50.4
Prupe.4G121000 Prunus persica HOM05D000361 ORTHO05D008294 6.6e-24 114.8 141 48.9
TAR627G0013 Trochodendron aralioides HOM05D000361 ORTHO05D008294 6.6e-24 114.8 141 48.9
Ciclev10014269m.g Citrus clementina HOM05D000361 ORTHO05D008294 8.6e-24 114.4 141 48.2
PGR044G0817 Punica granatum HOM05D000361 ORTHO05D008294 8.6e-24 114.4 141 48.9
Carub.0008s0363 Capsella rubella HOM05D000361 ORTHO05D008294 1.1e-23 114.0 141 48.9
FAN21G0569 Fragaria x ananassa HOM05D000361 ORTHO05D008294 1.1e-23 114.0 141 49.6
MD05G1242400 Malus domestica HOM05D000361 ORTHO05D008294 1.1e-23 114.0 141 49.6
MD10G1224200 Malus domestica HOM05D000361 ORTHO05D008294 1.1e-23 114.0 141 49.6
CARHR178260 Cardamine hirsuta HOM05D000361 ORTHO05D008294 1.5e-23 113.6 141 48.9
Thhalv10000779m.g Eutrema salsugineum HOM05D000361 ORTHO05D008294 1.9e-23 113.2 141 49.6
BcaC06g34528 Brassica carinata HOM05D000361 ORTHO05D008294 2.5e-23 112.8 141 49.6
C07p27530 Brassica napus HOM05D000361 ORTHO05D008294 2.5e-23 112.8 141 49.6
BolC7t43284H Brassica oleracea HOM05D000361 ORTHO05D008294 2.5e-23 112.8 141 49.6
THA.LOC104811945 Tarenaya hassleriana HOM05D000361 ORTHO05D008294 3.3e-23 112.5 140 47.9
SalBow6G3398 Salvia bowleyana HOM05D000361 ORTHO05D008294 4.3e-23 112.1 148 46.6
SalBow6G5453 Salvia bowleyana HOM05D000361 ORTHO05D008294 4.3e-23 112.1 148 46.6
CDE10G0589 Ceratophyllum demersum HOM05D000361 ORTHO05D008294 5.6e-23 111.7 141 47.5
COL.COLO4_25023 Corchorus olitorius HOM05D000361 ORTHO05D008294 5.6e-23 111.7 140 49.3
FAN25G0043 Fragaria x ananassa HOM05D000361 ORTHO05D008294 5.6e-23 111.7 141 48.9
FAN25G0195 Fragaria x ananassa HOM05D000361 ORTHO05D008294 5.6e-23 111.7 141 48.9
GSVIVG01003253001 Vitis vinifera HOM05D000361 ORTHO05D008294 5.6e-23 111.7 177 43.5
MBI06_g26561_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008294 7.3e-23 111.3 141 47.5
HanXRQChr07g0187741 Helianthus annuus HOM05D000361 ORTHO05D008294 9.5e-23 110.9 141 49.6
PSO541G2719 Papaver somniferum HOM05D000361 ORTHO05D008294 9.5e-23 110.9 141 46.1
PSO541G6368 Papaver somniferum HOM05D000361 ORTHO05D008294 9.5e-23 110.9 141 46.1
PSO675G8445 Papaver somniferum HOM05D000361 ORTHO05D008294 9.5e-23 110.9 141 46.1
Aa31LG9G8530 Aethionema arabicum HOM05D000361 ORTHO05D008294 1.2e-22 110.5 141 48.2
CAN.G809.9 Capsicum annuum HOM05D000361 ORTHO05D008294 2.8e-22 109.4 141 47.5
DCAR_003731 Daucus carota HOM05D000361 ORTHO05D008294 6.2e-22 108.2 141 48.2
BcaC03g16683 Brassica carinata HOM05D000361 ORTHO05D008294 1.1e-21 107.5 141 48.2
PGSC0003DMG400013633 Solanum tuberosum HOM05D000361 ORTHO05D008294 1.1e-21 107.5 141 47.5
Lsat_1_v5_gn_9_100181 Lactuca sativa HOM05D000361 ORTHO05D008294 1.4e-21 107.1 141 48.9
Oeu039911.1 Olea europaea HOM05D000361 ORTHO05D008294 1.8e-21 106.7 140 45.7
Solyc02g082180.3 Solanum lycopersicum HOM05D000361 ORTHO05D008294 2.3e-21 106.3 141 46.8
Sopen02g026840 Solanum pennellii HOM05D000361 ORTHO05D008294 2.3e-21 106.3 141 46.8
Zm00001eb350340 Zea mays HOM05D000361 ORTHO05D008294 2.3e-21 106.3 141 47.5
Zm00001eb284360 Zea mays HOM05D000361 ORTHO05D008294 3.1e-21 105.9 141 47.5
BolC2t10553H Brassica oleracea HOM05D000361 ORTHO05D008294 4.0e-21 105.5 141 47.5
C02p45220 Brassica napus HOM05D000361 ORTHO05D008294 8.9e-21 104.4 142 47.2
Os05g0235800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D008294 1.2e-20 104.0 141 46.8
ECA240G0581 Erigeron canadensis HOM05D000361 ORTHO05D008294 2.6e-20 102.8 141 46.8
Aqoxy1G01354 Aquilegia oxysepala HOM05D000361 ORTHO05D008294 5.8e-20 101.7 139 46.8
HPP92_000506 Vanilla planifolia HOM05D000361 ORTHO05D008294 5.8e-20 101.7 139 46.8
SHI08119 Sapria himalayana HOM05D000361 ORTHO05D008294 2.2e-19 99.8 141 44.7
unitig_37.g13054 Utricularia gibba HOM05D000361 ORTHO05D008294 2.2e-19 99.8 140 46.4
ATR0737G139 Amborella trichopoda HOM05D000361 ORTHO05D008294 1.1e-18 97.4 139 43.9
MELO3C006995.2 Cucumis melo HOM05D000361 ORTHO05D008294 1.1e-18 97.4 113 48.7
Lj1C1152G4 Lonicera japonica HOM05D000361 ORTHO05D008294 1.1e-18 97.4 140 45.0
SEGI_18737 Sequoiadendron giganteum HOM05D000361 ORTHO05D008294 4.1e-18 95.5 141 44.0
A02p28500 Brassica napus HOM05D000361 ORTHO05D023782 1.3e-16 90.5 195 35.4
BraA02t07885Z Brassica rapa HOM05D000361 ORTHO05D023782 1.1e-13 80.9 189 33.9
Mapoly0119s0016 Marchantia polymorpha HOM05D000361 ORTHO05D008294 3.4e-12 75.9 127 37.8
RcHm_v2.0_Chr7g0214621 Rosa chinensis HOM05D000361 ORTHO05D008294 9.9e-12 74.3 70 57.1
CBR_g12702 Chara braunii HOM05D000361 ORTHO05D008294 8.3e-11 71.2 136 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1744 Anthoceros agrestis HOM05D000361 ORTHO05D008294 1.1e-10 70.9 127 37.8
Pp3c23_390 Physcomitrium patens HOM05D000361 ORTHO05D008294 2.4e-10 69.7 135 35.6
Atru.chr10.210 Acer truncatum HOM05D000361 ORTHO05D030746 9.2e-10 67.8 59 62.7
SMO364G0539 Selaginella moellendorffii HOM05D000361 ORTHO05D008294 9.2e-10 67.8 136 33.8
MCO01G695 Micromonas commoda HOM05D000361 ORTHO05D008294 2.1e-09 66.6 68 54.4
PRCOL_00003449 Prasinoderma coloniale HOM05D000361 ORTHO05D008294 2.7e-09 66.2 68 51.5
Atru.chr10.223 Acer truncatum HOM05D000361 ORTHO05D030746 7.8e-09 64.7 51 66.7
BcaB07g30511 Brassica carinata HOM05D000361 ORTHO05D016785 2.3e-08 63.2 40 72.5
BcaB07g30513 Brassica carinata HOM05D000361 ORTHO05D016785 2.3e-08 63.2 40 72.5
Oeu041762.1 Olea europaea HOM05D000361 ORTHO05D005006 3.9e-08 62.4 106 37.7
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 1.1e-07 60.8 39 71.8
Cre03.g178650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D008294 1.6e-06 57.0 68 45.6
TPR.G27603 Trifolium pratense HOM05D000361 ORTHO05D029981 3.6e-06 55.8 114 36.0


User provided reference genes

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