Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006619 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D111492 1.3e-54 216.1 102 100.0
CSS0007551 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D111836 1.1e-53 213.0 102 99.0
Dinv17300 Davidia involucrata HOM05D000104 ORTHO05D006071 7.3e-18 94.0 45 93.3
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 1.4e-16 89.7 45 84.4
Actinidia20024 Actinidia chinensis HOM05D000104 ORTHO05D006071 1.8e-16 89.4 45 88.9
vmacro23048 Vaccinium macrocarpon HOM05D000104 ORTHO05D006071 4.0e-16 88.2 45 84.4
vmacro23146 Vaccinium macrocarpon HOM05D000104 ORTHO05D006071 4.0e-16 88.2 45 84.4
Cfa002182 Carpinus fangiana HOM05D000104 ORTHO05D006071 2.6e-15 85.5 45 84.4
Nn5g28449 Nelumbo nucifera HOM05D000104 ORTHO05D006071 1.7e-14 82.8 45 82.2
Haze_25321 Corylus avellana HOM05D000104 ORTHO05D006071 2.2e-14 82.4 45 80.0
Eucgr.H05148 Eucalyptus grandis HOM05D000104 ORTHO05D006071 2.9e-14 82.0 90 47.8
QL10p041777 Quercus lobata HOM05D000104 ORTHO05D006071 2.9e-14 82.0 45 82.2
GSVIVG01026450001 Vitis vinifera HOM05D000104 ORTHO05D006071 2.9e-14 82.0 45 82.2
PGR102G2777 Punica granatum HOM05D000104 ORTHO05D006071 3.7e-14 81.6 90 47.8
TAR628G1730 Trochodendron aralioides HOM05D000104 ORTHO05D006071 3.7e-14 81.6 45 82.2
Nn1g08948 Nelumbo nucifera HOM05D000104 ORTHO05D006071 6.4e-14 80.9 45 80.0
Cc02_g29430 Coffea canephora HOM05D000104 ORTHO05D006071 8.3e-14 80.5 45 75.6
Potri.007G102800 Populus trichocarpa HOM05D000104 ORTHO05D006071 1.8e-13 79.3 45 77.8
Sabra07G0084400 Salix brachista HOM05D000104 ORTHO05D006071 1.8e-13 79.3 45 77.8
QL10p041836 Quercus lobata HOM05D000104 ORTHO05D006071 2.4e-13 79.0 45 80.0
VMungo0251G3768 Vigna mungo HOM05D000104 ORTHO05D006071 3.2e-13 78.6 45 77.8
arahy.Tifrunner.gnm1.ann1.DAD8TC Arachis hypogaea HOM05D000104 ORTHO05D006071 4.1e-13 78.2 45 77.8
Potri.005G066600 Populus trichocarpa HOM05D000104 ORTHO05D006071 4.1e-13 78.2 45 75.6
arahy.Tifrunner.gnm1.ann1.H21J0D Arachis hypogaea HOM05D000104 ORTHO05D006071 5.4e-13 77.8 45 77.8
CiPaw.04G080100 Carya illinoinensis HOM05D000104 ORTHO05D006071 7.0e-13 77.4 45 80.0
Phvul.002G274300 Phaseolus vulgaris HOM05D000104 ORTHO05D006071 7.0e-13 77.4 45 77.8
THA.LOC104800148 Tarenaya hassleriana HOM05D000104 ORTHO05D006071 9.2e-13 77.0 90 45.6
Ca_17624_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006071 1.6e-12 76.3 45 77.8
Ca_21740_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006071 1.6e-12 76.3 45 77.8
Glyma.05G193900 Glycine max HOM05D000104 ORTHO05D006071 2.7e-12 75.5 45 73.3
Sabra05G0054900 Salix brachista HOM05D000104 ORTHO05D006071 2.7e-12 75.5 45 73.3
SalBow5G2719 Salvia bowleyana HOM05D000104 ORTHO05D006071 3.5e-12 75.1 45 71.1
MBI03_g13493_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D006071 4.6e-12 74.7 66 53.0
Lalb_Chr12g0203051 Lupinus albus HOM05D000104 ORTHO05D006071 7.8e-12 73.9 45 73.3
Medtr8g094070 Medicago truncatula HOM05D000104 ORTHO05D006071 7.8e-12 73.9 45 75.6
Atru.chr4.943 Acer truncatum HOM05D000104 ORTHO05D006071 1.0e-11 73.6 90 47.8
Hma1.2p1_2601F.1_g325200 Hydrangea macrophylla HOM05D000104 ORTHO05D006071 2.3e-11 72.4 53 71.7
Ciclev10000096m.g Citrus clementina HOM05D000104 ORTHO05D006071 3.0e-11 72.0 45 71.1
MELO3C024599.2 Cucumis melo HOM05D000104 ORTHO05D006071 3.0e-11 72.0 45 71.1
CsaV3_6G041230 Cucumis sativus L. HOM05D000104 ORTHO05D006071 3.0e-11 72.0 45 71.1
Glyma.08G001900 Glycine max HOM05D000104 ORTHO05D006071 3.0e-11 72.0 45 71.1
Hma1.2p1_0512F.1_g169270 Hydrangea macrophylla HOM05D000104 ORTHO05D006071 3.0e-11 72.0 45 80.0
CDE04G0721 Ceratophyllum demersum HOM05D000104 ORTHO05D006071 3.9e-11 71.6 45 68.9
DCAR_020007 Daucus carota HOM05D000104 ORTHO05D006071 5.0e-11 71.2 43 76.7
Thhalv10003558m.g Eutrema salsugineum HOM05D000104 ORTHO05D006071 5.0e-11 71.2 90 43.3
Sc09g0002280 Simmondsia chinensis HOM05D000104 ORTHO05D006071 5.0e-11 71.2 45 73.3
ClCG01G015120 Citrullus lanatus HOM05D000104 ORTHO05D006071 6.6e-11 70.9 45 68.9
Lsat_1_v5_gn_3_126201 Lactuca sativa HOM05D000104 ORTHO05D006071 6.6e-11 70.9 45 73.3
unitig_26.g9608 Utricularia gibba HOM05D000104 ORTHO05D006071 6.6e-11 70.9 45 64.4
Aqoxy6G00301 Aquilegia oxysepala HOM05D000104 ORTHO05D006071 8.6e-11 70.5 41 80.5
COL.COLO4_35752 Corchorus olitorius HOM05D000104 ORTHO05D006071 8.6e-11 70.5 45 66.7
Lj4g0008367 Lotus japonicus HOM05D000104 ORTHO05D006071 8.6e-11 70.5 45 75.6
SGA_v2.0_scaffold212G42200 Striga asiatica HOM05D000104 ORTHO05D006071 8.6e-11 70.5 45 75.6
Thecc.01G133200 Theobroma cacao HOM05D000104 ORTHO05D006071 1.1e-10 70.1 45 68.9
Oeu009636.2 Olea europaea HOM05D000104 ORTHO05D006071 1.5e-10 69.7 45 68.9
Psat7g045440 Pisum sativum HOM05D000104 ORTHO05D006071 1.5e-10 69.7 45 68.9
Sed0020852 Sechium edule HOM05D000104 ORTHO05D006071 1.5e-10 69.7 45 71.1
HanXRQChr13g0423701 Helianthus annuus HOM05D000104 ORTHO05D006071 2.5e-10 68.9 45 71.1
AL8G41210 Arabidopsis lyrata HOM05D000104 ORTHO05D006071 3.3e-10 68.6 45 68.9
Carub.0008s2473 Capsella rubella HOM05D000104 ORTHO05D006071 3.3e-10 68.6 45 68.9
Gohir.A09G004100 Gossypium hirsutum HOM05D000104 ORTHO05D006071 4.3e-10 68.2 46 65.2
Gohir.D09G003600 Gossypium hirsutum HOM05D000104 ORTHO05D006071 4.3e-10 68.2 46 65.2
TWI31G0382 Tripterygium wilfordii HOM05D000104 ORTHO05D006071 4.3e-10 68.2 90 46.7
CARHR277860 Cardamine hirsuta HOM05D000104 ORTHO05D006071 5.6e-10 67.8 45 66.7
ECA240G1465 Erigeron canadensis HOM05D000104 ORTHO05D006071 5.6e-10 67.8 46 71.7
Nitab4.5_0006307g0040 Nicotiana tabacum HOM05D000104 ORTHO05D006071 5.6e-10 67.8 45 68.9
Prupe.4G275700 Prunus persica HOM05D000104 ORTHO05D006071 5.6e-10 67.8 45 73.3
A06p30560 Brassica napus HOM05D000104 ORTHO05D006071 1.2e-09 66.6 90 42.2
BraA06t26005Z Brassica rapa HOM05D000104 ORTHO05D006071 1.2e-09 66.6 90 42.2
Lj4g0017230 Lotus japonicus HOM05D000104 ORTHO05D006071 1.2e-09 66.6 66 51.5
PSO170G5372 Papaver somniferum HOM05D000104 ORTHO05D006071 1.2e-09 66.6 45 64.4
BcaB02g09760 Brassica carinata HOM05D000104 ORTHO05D006071 1.6e-09 66.2 90 42.2
Sp2g27010 Schrenkiella parvula HOM05D000104 ORTHO05D006071 1.6e-09 66.2 90 42.2
Nitab4.5_0000316g0170 Nicotiana tabacum HOM05D000104 ORTHO05D006071 2.1e-09 65.9 45 66.7
TPR.G37376 Trifolium pratense HOM05D000104 ORTHO05D006071 2.1e-09 65.9 45 71.1
AT5G63950 Arabidopsis thaliana HOM05D000104 ORTHO05D006071 2.8e-09 65.5 45 64.4
Solyc01g068280.3 Solanum lycopersicum HOM05D000104 ORTHO05D006071 3.6e-09 65.1 45 64.4
Sopen01g030220 Solanum pennellii HOM05D000104 ORTHO05D006071 3.6e-09 65.1 45 64.4
HPP92_000084 Vanilla planifolia HOM05D000104 ORTHO05D006071 3.6e-09 65.1 41 68.3
MSTRG.16996 Avicennia marina HOM05D000104 ORTHO05D006071 4.7e-09 64.7 45 66.7
CAN.G410.42 Capsicum annuum HOM05D000104 ORTHO05D006071 4.7e-09 64.7 45 66.7
Gorai.006G005000 Gossypium raimondii HOM05D000104 ORTHO05D006071 4.7e-09 64.7 46 63.0
MD15G1135700 Malus domestica HOM05D000104 ORTHO05D006071 4.7e-09 64.7 45 68.9
Manes.13G085000 Manihot esculenta HOM05D000104 ORTHO05D006071 4.7e-09 64.7 45 71.1
ATR0188G008 Amborella trichopoda HOM05D000104 ORTHO05D006071 6.2e-09 64.3 42 71.4
Migut.B01201 Erythranthe guttata HOM05D000104 ORTHO05D006071 6.2e-09 64.3 45 64.4
PSO528G0238 Papaver somniferum HOM05D000104 ORTHO05D006071 6.2e-09 64.3 45 60.0
Peaxi162Scf00087g00224 Petunia axillaris HOM05D000104 ORTHO05D006071 8.0e-09 63.9 45 64.4
Hund21803 Selenicereus undatus HOM05D000104 ORTHO05D006071 1.4e-08 63.2 45 66.7
RcHm_v2.0_Chr2g0122191 Rosa chinensis HOM05D000104 ORTHO05D006071 1.8e-08 62.8 45 68.9
Eucgr.C01558 Eucalyptus grandis HOM05D000104 ORTHO05D006071 3.1e-08 62.0 45 66.7
BcaC01g02649 Brassica carinata HOM05D000104 ORTHO05D006071 4.0e-08 61.6 90 40.0
BcaC01g02651 Brassica carinata HOM05D000104 ORTHO05D006071 4.0e-08 61.6 90 40.0
C03p62400 Brassica napus HOM05D000104 ORTHO05D006071 4.0e-08 61.6 90 40.0
BolC3t18499H Brassica oleracea HOM05D000104 ORTHO05D006071 4.0e-08 61.6 90 40.0
FvH4_1g24690 Fragaria vesca HOM05D000104 ORTHO05D006071 4.0e-08 61.6 45 66.7
FAN19G1002 Fragaria x ananassa HOM05D000104 ORTHO05D006071 4.0e-08 61.6 45 66.7
FAN26G2158 Fragaria x ananassa HOM05D000104 ORTHO05D006071 5.2e-08 61.2 45 66.7
CANSAT01G0184 Cannabis sativa HOM05D000104 ORTHO05D006071 6.8e-08 60.8 49 61.2
Lsat_1_v5_gn_3_126241 Lactuca sativa HOM05D000104 ORTHO05D006071 1.2e-07 60.1 82 42.7
SMO146G0288 Selaginella moellendorffii HOM05D000104 ORTHO05D006071 2.6e-07 58.9 41 65.9
SEGI_00887 Sequoiadendron giganteum HOM05D000104 ORTHO05D006071 4.4e-07 58.2 44 61.4
SEGI_24909 Sequoiadendron giganteum HOM05D000104 ORTHO05D006071 4.4e-07 58.2 44 61.4
Ah.04g157970 Amaranthus hybridus HOM05D000104 ORTHO05D006071 7.5e-07 57.4 62 48.4
Pp3c2_11030 Physcomitrium patens HOM05D000104 ORTHO05D006071 9.8e-07 57.0 44 65.9
AUR62000507 Chenopodium quinoa HOM05D000104 ORTHO05D006071 1.3e-06 56.6 45 62.2
AUR62006852 Chenopodium quinoa HOM05D000104 ORTHO05D006071 1.3e-06 56.6 45 62.2
Pp3c14_20620 Physcomitrium patens HOM05D000104 ORTHO05D006071 1.3e-06 56.6 44 65.9
Aa31LG1G17950 Aethionema arabicum HOM05D000104 ORTHO05D006071 2.9e-06 55.5 47 57.4

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings