Gene: vmacro23166

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro23166
  • Transcript Identifier vmacro23166-RA
  • Gene Type Coding gene
  • Location scaffold00576_Vaccinium_macrocarpon_Stevens_v1 : 57406-65105 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro23166_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PHN1: Protein argonaute PNH1 (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance Os06g0597400
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development Os06g0597400
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc12g006790.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os06g0597400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR014811 Argonaute, linker 1 domain
IPR003165 Piwi domain
IPR036397 Ribonuclease H superfamily
IPR032472 Argonaute linker 2 domain
IPR036085 PAZ domain superfamily
IPR032474 Protein argonaute, N-terminal
IPR032473 Protein argonaute, Mid domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
16.9.2.7 RNA processing.mRNA silencing.miRNA pathway.miRNA recruiting factor (AGO1/AGO10)