Gene: Zm00001eb223140

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb223140
  • Transcript Identifier Zm00001eb223140_T001
  • Gene Type Coding gene
  • Location 5 : 35738014-35765623 : positive

Gene Family Information

  • ID HOM05D000762
  • #Genes/#Species 768/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb223140_T001
  • pid Zm00001eb223140_P001
  • uniprot A0A1D6GQT7
  • uniprot A0A1D6GQU9
  • uniprot A0A317YG40
  • uniprot A0A317YJ92
  • uniprot A0A1D6GQU2
  • uniprot B7ZZ67
  • uniprot A0A1D6JPX6
  • uniprot A0A1D6GQU1
  • uniprot B7ZZL1
  • uniprot A0A096QHL5
  • uniprot A0A1D6KVE5
  • uniprot B6SJQ2
  • uniprot A0A3L6EWA9
  • V4_identifier Zm00001d014187

Descriptions

  • Description Zm00001e129129
  • Description Carbon catabolite repressor protein 4 homolog 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT1G31500
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT3G58560
GO:0019252
ISO
PLAZA Integrative Orthologystarch biosynthetic process AT3G58560
GO:0005986
ISO
PLAZA Integrative Orthologysucrose biosynthetic process AT3G58560
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic
GO:0000289
IBA
GOA Databasenuclear-transcribed mRNA poly(A) tail shortening

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004532
ISO
PLAZA Integrative Orthologyexoribonuclease activity AT1G31500
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G31500
GO:0004535
IBA
GOA Databasepoly(A)-specific ribonuclease activity
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G58560
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT3G58560
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G31500
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0030014
IBA
GOA DatabaseCCR4-NOT complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR005135 Endonuclease/exonuclease/phosphatase
Mapman id Description
16.4.2.1.2.1 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA deadenylation.CCR4-NOT complex.deadenylase component CCR4