Gene: Zm00001eb199750

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb199750
  • Transcript Identifier Zm00001eb199750_T001
  • Gene Type Coding gene
  • Location 4 : 204990635-204994293 : negative

Gene Family Information

  • ID HOM05D005396
  • #Genes/#Species 141/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb199750_T001
  • pid Zm00001eb199750_P001
  • uniprot A0A1D6QKM3
  • uniprot A0A3L6G7S5
  • V4_identifier Zm00001d052877

Descriptions

  • Description Zm00001e113901
  • Description embryo defective 1379
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G21140
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0006301
IBA
GOA Databasepostreplication repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G21140
GO:0004842
IBA
GOA Databaseubiquitin-protein transferase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030915
IBA
IEA
GOA DatabaseSmc5-Smc6 complex
GO:0030915
IEA
InterProSmc5-Smc6 complex
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011513 Non-structural maintenance of chromosomes element 1
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
14.3.6.2.2 DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1-NSE3-NSE4 subcomplex.ubiquitin ligase component NSE1