Gene: TPR.G34611

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G34611
  • Transcript Identifier TPR.T35787
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_604 : 20007-31150 : positive

Gene Family Information

  • ID HOM05D001201
  • #Genes/#Species 520/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA35787.v2
  • id Tp57577_TGAC_v2_gene34611.v2
  • pacid 35968724
  • uniprot A0A2K3JPB9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006284
IEA
InterProbase-excision repair
GO:0080111
IEA
GOA DatabaseDNA demethylation
GO:0080111
IEA
InterProDNA demethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0019104
IEA
GOA DatabaseDNA N-glycosylase activity
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0035514
IEA
GOA DatabaseDNA demethylase activity
GO:0035514
IEA
InterProDNA demethylase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR028925 Demeter, RRM-fold domain
IPR003265 HhH-GPD domain
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR044811 DNA glycosylase, plant
Mapman id Description
12.5.3.1 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.methylcytosine-specific DNA glycosylase (ROS1)