Gene: TPR.G1652

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G1652
  • Transcript Identifier TPR.T1685
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG6 : 2890804-2893358 : negative

Gene Family Information

  • ID HOM05D006444
  • #Genes/#Species 124/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA1685.v2
  • id Tp57577_TGAC_v2_gene1652.v2
  • pacid 35975430
  • uniprot A0A2K3M027

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000738
ISO
PLAZA Integrative OrthologyDNA catabolic process, exonucleolytic AT5G26940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008408
IEA
GOA Database3'-5' exonuclease activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004527
ISO
PLAZA Integrative Orthologyexonuclease activity AT5G26940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G26940
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G26940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040393 Three-prime repair exonuclease 1/2
IPR013520 Exonuclease, RNase T/DNA polymerase III
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated