Gene: TPR.G11206

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G11206
  • Transcript Identifier TPR.T11568
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG7 : 20307215-20313647 : positive

Gene Family Information

  • ID HOM05D001814
  • #Genes/#Species 361/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA11568.v2
  • id Tp57577_TGAC_v2_gene11206.v2
  • pacid 35955632

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G55990
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G55990
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D001814
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process AT3G55990
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G55990
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G55990
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT3G55990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001814
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D001814
GO:1990538
ISO
PLAZA Integrative Orthologyxylan O-acetyltransferase activity AT3G55990
GO:0016413
ISO
PLAZA Integrative OrthologyO-acetyltransferase activity AT3G55990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G55990
GO:0015934
ISO
PLAZA Homology (enrichment)large ribosomal subunit HOM05D001814

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025846 PMR5 N-terminal domain
IPR029962 Trichome birefringence-like family
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
IPR023674 Ribosomal protein L1-like
IPR026057 PC-Esterase
Mapman id Description
17.1.2.1.10 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10a
21.2.2.2.2 Cell wall organisation.hemicellulose.xylan.modification and degradation.xylan O-acetyltransferase (XOAT)