Gene: AT3G55990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55990
  • Transcript Identifier AT3G55990.1
  • Gene Type Coding gene
  • Location Chr3 : 20780410-20782931 : positive

Gene Family Information

  • ID HOM05D000043
  • #Genes/#Species 4839/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55990.1
  • symbol ESK1
  • Alias TBL29,TRICHOME BIREFRINGENCE-LIKE 29
  • full_name ESKIMO 1
  • uniprot Q9LY46

Descriptions

  • Description trichome birefringence-like protein (DUF828)
  • Computational description ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, positive regulation of transcription, response to cold; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast hits to 1309 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEP
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0050826
IEA
GOA Databaseresponse to freezing
GO:0050826
IMP
Gene Ontologyresponse to freezing2
GO:0050826
IEA
InterProresponse to freezing
GO:0009409
IMP
Gene Ontologyresponse to cold1
GO:0045492
IDA
Gene Ontologyxylan biosynthetic process3
GO:0009651
IMP
Gene Ontologyresponse to salt stress2
GO:0009414
IMP
Gene Ontologyresponse to water deprivation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016413
IDA
IBA
Gene OntologyO-acetyltransferase activity3 4
GO:1990538
IDA
Gene Ontologyxylan O-acetyltransferase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
IBA
Gene OntologyGolgi apparatus3 4
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026057 PC-Esterase
IPR029979 Protein ESKIMO 1
IPR029962 Trichome birefringence-like family
IPR025846 PMR5 N-terminal domain
Mapman id Description
21.2.2.2.2 Cell wall organisation.hemicellulose.xylan.modification and degradation.xylan O-acetyltransferase (XOAT)