Gene: THA.LOC104804716
General Information
Structural Information
- Species Tarenaya hassleriana
- Gene Identifier THA.LOC104804716
- Transcript Identifier THA.XM_010529060.2
- Gene Type Coding gene
- Location NW_010971790.1 : 29453-75827 : negative
Gene Family Information
- ID HOM05D003682
- #Genes/#Species 186/98
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- GeneID 104804716
- RefSeq XM_010529060.2
- RefSeq XP_010527362.2
- tid rna45921
- id gene30061
- gene LOC104804716
Descriptions
- Description geranylgeranyl transferase type-2 subunit alpha 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0018342 | IEA | InterPro | protein prenylation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G24490 |
| GO:0018344 | ISO | PLAZA Integrative Orthology | protein geranylgeranylation | AT4G24490 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008318 | IEA | InterPro | protein prenyltransferase activity | |
| GO:0004663 | ISO | PLAZA Integrative Orthology | Rab geranylgeranyltransferase activity | AT4G24490 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005968 | ISO | PLAZA Integrative Orthology | Rab-protein geranylgeranyltransferase complex | AT4G24490 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G24490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR002088 | Protein prenyltransferase, alpha subunit |
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR000477 | Reverse transcriptase domain |
| Mapman id | Description |
|---|---|
| 22.3.4.4.1.1 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.subunit alpha |