Gene: Sopen11g029840

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g029840
  • Transcript Identifier Sopen11g029840.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 65275340-65278566 : negative

Gene Family Information

  • ID HOM05D001045
  • #Genes/#Species 581/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g029840.1

Descriptions

  • Description Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta) (EF-1-beta) - Oryza sativa (Rice), Translation elongation factor EF1B/ribosomal protein S6 family protein | FUNCTIONS IN: translation elongation factor activity | INVOLVED IN: translational elongation, defense response to bacterium | LOCATED IN: apoplast, eukaryotic translation elongation factor 1 complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 , Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange , Translation elongation factor EF1B, beta/delta chains, conserved site | BEST Arabidopsis thaliana protein match is: Glutathione S-transferase, C-terminal-like, Translation elongation factor EF1B/ribosomal protein S6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
InterProtranslational elongation
GO:0009808
ISO
PLAZA Integrative Orthologylignin metabolic process AT1G30230
GO:2001006
ISO
PLAZA Integrative Orthologyregulation of cellulose biosynthetic process AT1G30230
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT5G19510
GO:0071668
ISO
PLAZA Integrative Orthologyplant-type cell wall assembly AT1G30230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003746
IEA
InterProtranslation elongation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G19510
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G19510
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G19510
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G19510
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G30230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014038 Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain
IPR014717 Translation elongation factor EF1B/ribosomal protein S6
IPR036219 Translation elongation factor eEF-1beta-like superfamily
IPR036282 Glutathione S-transferase, C-terminal domain superfamily
Mapman id Description
17.5.1.2.1 Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-beta/-delta