Gene: Sopen11g029830

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g029830
  • Transcript Identifier Sopen11g029830.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 65268943-65271757 : negative

Gene Family Information

  • ID HOM05D005180
  • #Genes/#Species 145/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g029830.1

Descriptions

  • Description Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. | THO7 | CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 , Tho complex subunit 7/Mft1p | BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000445
IEA
InterProTHO complex part of transcription export complex
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT5G16790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008501 THO complex subunit 7/Mft1
Mapman id Description
16.10.1.1.6 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC7